Gene Dole_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2221 
Symbol 
ID5695068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp2694378 
End bp2694872 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content58% 
IMG OID641264826 
Producttranscription elongation factor GreA 
Protein accessionYP_001530102 
Protein GI158522232 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCTTT TCGCGGAGGC AGTAGTGGTA GAAACCATTC CGATTACCCG ACAGGGGTAT 
GAAAAGCTCA ACCAGGAGCT GAGTCGTCTC AAGGCCGTTG AGCGACCGGC CAACATTCGG 
GCCATTGAAG AGGCCCGGGC CCACGGTGAC CTTTCCGAAA ACGCCGAGTT CCACGCGGCC 
AAAGAGAAAC AGGGGTTCAT CGAGGGCCGC ATCAACGACC TGGAGCACAA GCTGGCCAGC 
GCCAACATCA TCGACCCGTC CACCCTGACA AAGGACCGGG CCGTGTTCGG CTGCACCATC 
CGGCTGGAGA GCATTGACAC GGGTGATGAA GTGGAGTATC AACTGGTCGG CCCGGATGAG 
TCCAACATCG ACAACGGGCT TATTTCCGTG ACCTCCCCCC TGGGAAAGGC GATTCTGGGA 
AAGGTGCCCG GCGATGAGGT GGTGCTTCAG GCCCCGGGCG GCAAACGGAG TTATGAACTC 
ATAGAAATTC GATAA
 
Protein sequence
MHLFAEAVVV ETIPITRQGY EKLNQELSRL KAVERPANIR AIEEARAHGD LSENAEFHAA 
KEKQGFIEGR INDLEHKLAS ANIIDPSTLT KDRAVFGCTI RLESIDTGDE VEYQLVGPDE 
SNIDNGLISV TSPLGKAILG KVPGDEVVLQ APGGKRSYEL IEIR