| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2210 |
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| Symbol | |
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| ID | 5695056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2681946 |
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| End bp | 2683262 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641264814 |
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| Product | beta-propeller repeat-containing to-pal system protein TolB |
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| Protein accession | YP_001530091 |
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| Protein GI | 158522221 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000769838 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAAGC GATCCCTGCT TGTTCTGGCC CTGCTGATCT GTCTGCCGGC CACACTTTTT
GCCCAGTATG ATTACGTGCG GATCAGCAAC CCGTTTCTGC ATAAGATTCC CATTGCCGTG
CCCCTGTTTC AGGCCCTTAC CGGTACCGAG CCCGAGGTCA AGGCCGCACA GAGCGGGGCC
GACCTGCTGG CCGACACCCT GGAGTTCACC CGTTATTTTA ACCTGATCAA CCGGGCCGCC
TTTCTGGAAC GGCCGGACCG GACCGGGGTG ACCCTGGCCG ACATTGATTG TAAGAACTGG
CGCGACATCG GCGCCGAGTT TCTGATCACC GGCGGCGTGA CAGTGGCCGG GGGAATGATG
GAGATGGAAC TCCGGCTGTT TGACGTGTTC AAGGAGCGGA TGATTCTCGG CAAAAAGTAC
AAGGGCAAAC CTGTGGACCA GCGGAAAATG ATCCGCCGGT TCTGCGCGGA GGTGATGGAA
CAGCTTACCG GCACCCCAGG CATCTTTGAA AGCAGAATCG CATTTATCTC CACCGGCGAC
GGCAGCAAGG AGATCTATGC CTGTGAATTT GACGGGTACA ACCCGCAGCG GATCACGCGC
AACAGCAGCA TCAATCTCTC CCCGGCCTGG TCGTCGGATG GCCAGTGGCT GGCCTACACC
TCCTACCGCA AGGGGGGGCC GGACCTTTAC ATCACGCACC TCACCGAAAA CCGGGGGACG
GTTTTTTCCA AAGAGGGGAT TAACATCGCG CCGTCCTGGG TGCCGGGCCA GTTCATGCTG
GCCGCCACTC TCTCTTTTGA AGGGGACCAG GAAATCTACC TGCTCACCGG ATCCGGCACG
GTTGTCCGGC GGCTGACCCG AAGCTGGGGC ATTGATGTCT CTCCCACTTT TTCGCCGGAC
GGCAAACGCA TGGCCTTTGT GTCCGGCCGG GCCGGCAGCC CCCAGATTTT TATCATGGAC
ATGGGCTCCG GCCGCACCCA AAGGTTGACT TTTGAGGGCG GATACAATAC AAATCCTAGT
TGGAACCCTG TAAATGACAC GATTGCGTAC TGCGCCATGA CCGGCGGTGC GTTTAATGTT
CGTGTCATTG ACGTAAAAAC AGGCGCCACT GTGGCCCTGA CCGCCGACCA GGGTGATAAC
GAGTCTCCCT CATGGTCGCC GGACGGCAGC CTGATTGCGT TCAGCTCCAC GCGGGAGGCC
GGGGTTTCCA GGATTTACGT GATGACCGCC GCCGGCACCG ATCCAAGGCG GCTGTTGATA
CTGCCGGGGG AACAGACAGG CCCGAAATGG TCGCCGGCCG TGGCGGCGGG CAGATAA
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| Protein sequence | MVKRSLLVLA LLICLPATLF AQYDYVRISN PFLHKIPIAV PLFQALTGTE PEVKAAQSGA
DLLADTLEFT RYFNLINRAA FLERPDRTGV TLADIDCKNW RDIGAEFLIT GGVTVAGGMM
EMELRLFDVF KERMILGKKY KGKPVDQRKM IRRFCAEVME QLTGTPGIFE SRIAFISTGD
GSKEIYACEF DGYNPQRITR NSSINLSPAW SSDGQWLAYT SYRKGGPDLY ITHLTENRGT
VFSKEGINIA PSWVPGQFML AATLSFEGDQ EIYLLTGSGT VVRRLTRSWG IDVSPTFSPD
GKRMAFVSGR AGSPQIFIMD MGSGRTQRLT FEGGYNTNPS WNPVNDTIAY CAMTGGAFNV
RVIDVKTGAT VALTADQGDN ESPSWSPDGS LIAFSSTREA GVSRIYVMTA AGTDPRRLLI
LPGEQTGPKW SPAVAAGR
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