Gene Dole_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2209 
Symbol 
ID5695055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp2681374 
End bp2681919 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content57% 
IMG OID641264813 
Productpeptidoglycan-associated lipoprotein 
Protein accessionYP_001530090 
Protein GI158522220 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000116436 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA AACGGTTGTT TGTCATGTTT GTCATGCTGT TTGCCATATG CGGTCTGTTG 
TTTACCGTGT CTTGCGCAAA ACAGAGTGTG AAATCAGAGG CTACCGAGCT GGAAACAGAA 
TCCTCCCTCG CTGCCGATGA AGCATCTCAA ATGGCGGCCG AAGAGATGGC CGAGGCCGAA 
GCCATTGCCG CTGAAAAGGC CGCGGCCCGT CACGCTTTTG TCAACGAGAA CATCCATTTT 
GATTTTGACA AATCCACCCT GACCCCCGCG GCCCGGGAAA TTCTTCGGAC CAAGGCCACG 
TGGCTCCGGG ACAATTCGGA TGCGGCAGTA GTTGTTGAAG GCCATTGCGA CGAGCGGGGC 
ACCACCGAGT ACAACCTGGC CCTGGGTGAC CGGCGCGCCA AGGCGGCCAA GGATTTTCTG 
GTGGACATGG GCATCTCCGC GTCCCGCCTT TCCACCATCA GCTACGGCGA GGAAAGGCCC 
CTGGATCCCA GGAGCAACGA AACCGCCTGG GCAAAGAACC GTCGTGCCCA GTTTGTGCTC 
CGCTAA
 
Protein sequence
MEKKRLFVMF VMLFAICGLL FTVSCAKQSV KSEATELETE SSLAADEASQ MAAEEMAEAE 
AIAAEKAAAR HAFVNENIHF DFDKSTLTPA AREILRTKAT WLRDNSDAAV VVEGHCDERG 
TTEYNLALGD RRAKAAKDFL VDMGISASRL STISYGEERP LDPRSNETAW AKNRRAQFVL 
R