| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2204 |
|---|
| Symbol | |
|---|
| ID | 5695050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2676843 |
|---|
| End bp | 2678243 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641264808 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001530085 |
|---|
| Protein GI | 158522215 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3034] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGGA TAAACATGGT GTGGTATCGG GATTTATTGA AAGGCATCGG GCGATTTTTT
TGTGTGAACA TGCCGGCGGC AGCGATGGCG CTGGCGGTAC TGGGCATCTC CGGGACAGGG
GCCCAGGCAT TTTCCATTCC CGACCTGGTG GTCTATTCCG AGGAGGACCG GCCCCAGTAT
GTCATCCTGG TGGAAAAGGC CACCCAGCAG CTTTTCCTGT TTTCTTTTTA CAAAAATTCT
ATTCGCAAGG AAAAGCAGTG GAAGTGCTCC ACCGGTGAGA ACCATGGTCC CAAGCTGGTG
ATGGGTGACA AAAAAACACC GGAGGGCATC TATTTTTTCA CCCGCAAGTA CACAGACAGT
GAGCTGGCGC CGATTTATGG CACCCTTGCG TTCCCTCTGG ACTACCCCAA CGTGCTGGAT
CATGAAGCGG AAAAGAACGG CAGCGCCATC TGGCTTCACG GTACCAATAA AGTGTTGAAG
GACAATGATT CCAACGGCTG CGTGGCGCTG GAGAATGGCA GCATTGACGC GCTGGCCCCG
TATATAGAGC TTTATCATAC CCCCATCGTG ATCGTCCACG AGGTGGCCGA AGCCCCATGG
CAGGCCGTTC CCCGGGTGGA CAAGGCGGTG GGAGCCCTGG TGCGGCAATG GAATGACGCA
CTGGTTTCCG GCACCTACCA CGACTATCTT CGGTTTTATG ACCCCCGTTA CCTGCCCGAC
ATGGGGTGGT GGAAAAAGTG GCGCCGAGTG CGCGGCGAGG TGGCCGGGGA ACTTCCGGAC
CTTTACATTG ACATGGATTC GCTTCTGGTG GTTCGCTATG ACAAAAATTA TGTGGCCCTT
TTTGACCAGG TTGTTTCAGC CGGCGGCAGC TGGGTGAAAG CAGGCAGAAG AAAACTGTTC
CTGGAAGAGA CGACCAACGG ACTGAAGATT GTCGGTGACA CTTTTCAGGG ACCTGAGGTG
AAGGGGGGCG CCCAGAGTCC TTCCAACCGT CTGGTGGCGG CCTGCCGGAA CGTGTATGAC
GTGGCGGTGA CGGAGAAAAG TGTCCGCCGG ATGCTGGACC AGTGGCTGTC GGCATGGAGC
CGAATGGACA TGGACGCATA CGGCACCTTT TATGCCGGCG ATTTTGTTTT CGATGGCATG
AACAAAAAGG GGTGGCTGGC CTATAAGCGG AAATTGAACT GGCAGTATGA CTATATTCGC
GTGGCCATGG ACAACCTGCG GTTTGTGGAG ACATCACCCG CCGTTTGTGT GGTGACCTTC
ATTCAGAAAT ACGAGTCAGA CCGTTACAGC GATATGGGCC TGAAAACCCT GATCCTGAAA
AAGGAGGACG GGCAATGGAG GATTCACCGG GAGTCCTGGG AAGCGTTGGA CCTTCCGCCG
ACACCGAAAA CAGAGGGCTG A
|
|---|
| Protein sequence | MARINMVWYR DLLKGIGRFF CVNMPAAAMA LAVLGISGTG AQAFSIPDLV VYSEEDRPQY
VILVEKATQQ LFLFSFYKNS IRKEKQWKCS TGENHGPKLV MGDKKTPEGI YFFTRKYTDS
ELAPIYGTLA FPLDYPNVLD HEAEKNGSAI WLHGTNKVLK DNDSNGCVAL ENGSIDALAP
YIELYHTPIV IVHEVAEAPW QAVPRVDKAV GALVRQWNDA LVSGTYHDYL RFYDPRYLPD
MGWWKKWRRV RGEVAGELPD LYIDMDSLLV VRYDKNYVAL FDQVVSAGGS WVKAGRRKLF
LEETTNGLKI VGDTFQGPEV KGGAQSPSNR LVAACRNVYD VAVTEKSVRR MLDQWLSAWS
RMDMDAYGTF YAGDFVFDGM NKKGWLAYKR KLNWQYDYIR VAMDNLRFVE TSPAVCVVTF
IQKYESDRYS DMGLKTLILK KEDGQWRIHR ESWEALDLPP TPKTEG
|
|---|
| |