Gene Dole_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2190 
Symbol 
ID5695036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2661930 
End bp2662601 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content54% 
IMG OID641264794 
ProductTetR family transcriptional regulator 
Protein accessionYP_001530071 
Protein GI158522201 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAAG CAGCCAGAAC ACCCCAGGAA GTGGAACAGA CCCGTGAGCG GATTCTGGAC 
ACGGCCCTTG ACATCATCAT CAAGGACGGT TTTGAAAACT TAAGCCTGCG CAAGATCGCC
TCCCGCCTGG GCGTGACCCC CACCACCCTT TACAACTACT ATTCCAATAA AGATGAACTC
AACCTGATGA TCCGGGTGCG GGGCTTTGAA AAACTTTTTG CCCTGCTGAC AAAACAGGCC
GGCCCCCATT CCGACATTGA GGCCCGGTTC GGCGCCATGA TCCGTGGCTA CGTAACGTTC
GGCCTGACCT ATCCCAGCTA CTACGACCTC ATGTTCAACC TGCACACACC CAAGTACCTC
GACTATGTGG GCACCGACAT TGAGCCCCTG GCCCATCATG AAAAGCAGAC CGCCTTAAAA
TGCCTGGCCC TTTTTATCGA GCCCCTGGAA GCCTATATTC CGGGAAAGGG AGTGAAAAGG
GACCGGTTTA TCCTTCACCA GGTGGTGCGA TTCTGGTCCG ACCTCCATGG CCTGATCACC
CTTCACAACA GCCGGCTTTT TCATGAAGTG ATCGATACTG TGGACACGTT TATCAAACAG
CGCACCACCG AACTGATTGA CACGCTGCTG CAACTCAAAC AGCGCGTGGA TACCGGTGAA
GCACTGTTCT GA
 
Protein sequence
MPKAARTPQE VEQTRERILD TALDIIIKDG FENLSLRKIA SRLGVTPTTL YNYYSNKDEL 
NLMIRVRGFE KLFALLTKQA GPHSDIEARF GAMIRGYVTF GLTYPSYYDL MFNLHTPKYL
DYVGTDIEPL AHHEKQTALK CLALFIEPLE AYIPGKGVKR DRFILHQVVR FWSDLHGLIT
LHNSRLFHEV IDTVDTFIKQ RTTELIDTLL QLKQRVDTGE ALF