Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2190 |
Symbol | |
ID | 5695036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2661930 |
End bp | 2662601 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641264794 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001530071 |
Protein GI | 158522201 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAAG CAGCCAGAAC ACCCCAGGAA GTGGAACAGA CCCGTGAGCG GATTCTGGAC ACGGCCCTTG ACATCATCAT CAAGGACGGT TTTGAAAACT TAAGCCTGCG CAAGATCGCC TCCCGCCTGG GCGTGACCCC CACCACCCTT TACAACTACT ATTCCAATAA AGATGAACTC AACCTGATGA TCCGGGTGCG GGGCTTTGAA AAACTTTTTG CCCTGCTGAC AAAACAGGCC GGCCCCCATT CCGACATTGA GGCCCGGTTC GGCGCCATGA TCCGTGGCTA CGTAACGTTC GGCCTGACCT ATCCCAGCTA CTACGACCTC ATGTTCAACC TGCACACACC CAAGTACCTC GACTATGTGG GCACCGACAT TGAGCCCCTG GCCCATCATG AAAAGCAGAC CGCCTTAAAA TGCCTGGCCC TTTTTATCGA GCCCCTGGAA GCCTATATTC CGGGAAAGGG AGTGAAAAGG GACCGGTTTA TCCTTCACCA GGTGGTGCGA TTCTGGTCCG ACCTCCATGG CCTGATCACC CTTCACAACA GCCGGCTTTT TCATGAAGTG ATCGATACTG TGGACACGTT TATCAAACAG CGCACCACCG AACTGATTGA CACGCTGCTG CAACTCAAAC AGCGCGTGGA TACCGGTGAA GCACTGTTCT GA
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Protein sequence | MPKAARTPQE VEQTRERILD TALDIIIKDG FENLSLRKIA SRLGVTPTTL YNYYSNKDEL NLMIRVRGFE KLFALLTKQA GPHSDIEARF GAMIRGYVTF GLTYPSYYDL MFNLHTPKYL DYVGTDIEPL AHHEKQTALK CLALFIEPLE AYIPGKGVKR DRFILHQVVR FWSDLHGLIT LHNSRLFHEV IDTVDTFIKQ RTTELIDTLL QLKQRVDTGE ALF
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