Gene Dole_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2187 
Symbol 
ID5695033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2656266 
End bp2657444 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content62% 
IMG OID641264791 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001530068 
Protein GI158522198 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0311845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAAG CGGTGATTGT CAGTGCGGTG CGCACCCCGC TGGGCGCGTT TAACGGCGCT 
TTGGCCGGGG TTGGCGCCAC CCGGCTGGGT GCTATTGTGA TTCAGGAGGC TGTGGACCGG
GCCGGCATTG ATGCGGCAGC GGTCAACGAG GTGATTATGG GCATGGTGCT GCCCTGCGGG
TACGGCCAGA ATCCGGCCAG ACAGGCGGCG GTTCAGTCGG GCCTGCCCTG GGAGGCTGAA
TGTGTCACCG TGAACAAGGT GTGCGGGTCG GGCCTAAAGG CCGTGATGCT GGCGGCCCAG
GCCATTGCCG TAGGAGATGC CGATGTGGTG GTGGCCGGCG GCATGGAGAC CATGAGCATG
GCGCCTTATT ACCTTGAAAA GGCCCGTTTC GGCTACCGCA TGGGGCCGGG CGCCATTCAG
GACCACATGG TGCATGACGG GCTGTGGGAC GTGGTCAACG ACTTTCACAT GGGCATATCC
AATGAGCTGT GCTCGGAAAA ATATGCTGTC AGCCGGGAGG ATCAGGACCG GTACGCGGCA
GAGACCTATC GCCGGTCACT GGATGCCGTG ACATCGGGCC GGTTTGCCGA TGAGATTGTG
CCGGTGCCGG TGATGGGCAG AAAAGGGGAG ACCGTGCTCT TTTCCACTGA CGAGTGCCCC
CAGGAAACTT CCTACGAAAC CCTGGCCCGC ATGAAACCGG CCTTTAAGAA AGACGGCGTG
GGCACGGCGG GCAATGCCTC GGTGATCAGT GATGGCGCCG CCGCAGTGGT GGTGATGTCC
AGGGAAAAGG CGGCAGAATT CGGGTGCAAA CCTTTGGCCG TGATCGGAGC TCAGGCATCT
TACGGTATTG ACATGAAATA CGTGCTGATG GCACCGGTGT GGGCCATTCC CAAGTGTTTA
AAAAAGGAAG GCCTTGCCAT GGGCGACATC GACCTGTTTG AGATCAACGA GGCCTTTTCC
GGCTCCACCG TGGGCGTGAT CCGGGAACTG GGCCTTGACC CGGCAAAGGT CAACGTCAAC
GGCGGCAGCG TGGCCCTGGG CCATCCCATC GGCGCCAGCG GGTGCCGGGT GCTGGTGACC
CTGCTGTATG AAATGGCCCG GCGTAAGGCG AAAACCGGGC TGGCCTCTCT CTGCCTGGGC
GGCGGTGAGG CCGTGGCCCT GATTGTGAAA AGGGATTGA
 
Protein sequence
MREAVIVSAV RTPLGAFNGA LAGVGATRLG AIVIQEAVDR AGIDAAAVNE VIMGMVLPCG 
YGQNPARQAA VQSGLPWEAE CVTVNKVCGS GLKAVMLAAQ AIAVGDADVV VAGGMETMSM
APYYLEKARF GYRMGPGAIQ DHMVHDGLWD VVNDFHMGIS NELCSEKYAV SREDQDRYAA
ETYRRSLDAV TSGRFADEIV PVPVMGRKGE TVLFSTDECP QETSYETLAR MKPAFKKDGV
GTAGNASVIS DGAAAVVVMS REKAAEFGCK PLAVIGAQAS YGIDMKYVLM APVWAIPKCL
KKEGLAMGDI DLFEINEAFS GSTVGVIREL GLDPAKVNVN GGSVALGHPI GASGCRVLVT
LLYEMARRKA KTGLASLCLG GGEAVALIVK RD