| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2185 |
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| Symbol | |
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| ID | 5695031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2653191 |
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| End bp | 2654474 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641264789 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001530066 |
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| Protein GI | 158522196 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000212239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTAA AAACAAAATA CCGGCTGTCA ACCATCTCCA TTCTTCTGAT TGCAATCTGC
GCGGGGGCTG CCGTATGGAT GCCCGCGTGG TCTGCCATGG ACCACCAGTT CGATGTCATG
GAACAGCAGA TGACGGCCGA AAGCGAAATA AACGCGGCCA TGGAACAGTT CGACCAGTAT
GAACAGAGCA TTGAAGCCCA GTATGCAGCG GATGAGGCTT CCATTGAACA GACCTATGCG
ACCTACCAGC GGATCATCGA GGAGGAGTAC CGGGCCTATG AAAAGGAGAT CCTGAAAACC
TGGGTCAAGG CGGAAATCAG CACGGCCAAG CGGTGGGTGG AGTACGCCCC GGATTTTCAG
TCCCGCCATA TCGTGGACTT TGATCAGCAG TACCTTCAGA TCGACCTTAA CGTGGACGGC
AAGGAGATGG AGGCCCTGAT CGACACCCTG GTGGAACAGA AACTGCGGGA GATGATAACC
GAAGACCAGA AAACCGCGTT TGAGCGGGAC GTGCTTTCCC AGAACATTGA AAACCGGATC
ACCCAGGAGT CGCCCCATGT AAAGTCGGGC GAGGTCAAGG ACAGCCCGGT GCTGCTGAAA
ATGATCACGG GAAAGGACCA CCCCACGGAC CAGGAGATCG ACGCGGCCGT GGCGGCTTTA
AAACAGAACG CCACCATTTC CCGCACCCCG TCCAAGATGC CGGACACCGA CACGGTGAGC
CTTCGGGTTT CGCTGCCGGC GGGCGGCATG CAGCGCAAGG CCATGGCGTA CCGGCCCTAT
GTCAAATCCT ATGCAAATGA ACGGGGATTA AACGAGGCCC TGGTTTTTGC CGTGATTCAC
ACGGAAAGCG CCTTCAACCC CATGGCCCGG TCCCATGTAC CGGCCTACGG CCTGATGCAG
ATCGTTCCCC AGTCCGCCGG GCGGGATGCC GCCCAACTGC TTTTCGGCCG CCAGGTGCTG
CTCTCCCCCT CCTACCTGTA CAGCGAGCAG AATAACATCA ATGTGGGTAC CGCTTACCTC
TACATTCTTT ACAACCGGTA CCTTCGGGAA ATTACCAACC CCACCAGCCG CATGTACTGC
GCCATCGCGG CCTACAACAC CGGGGCCGGC AACGTGGCCA GGGCCTTTAC CGGCACCACC
AGCGTGAGCC GGGCCGCGCA GGCCATCAAC CGGATGTCGC CCCAGCAGGT TTACACCCAC
CTGATCCAGC GCCTGCCCCA TCAGGAGACC CGGGACTACC TGCAACGGGT TACCAGCCGC
ATGACCATGT ACCAGTCCAT GTAA
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| Protein sequence | MILKTKYRLS TISILLIAIC AGAAVWMPAW SAMDHQFDVM EQQMTAESEI NAAMEQFDQY
EQSIEAQYAA DEASIEQTYA TYQRIIEEEY RAYEKEILKT WVKAEISTAK RWVEYAPDFQ
SRHIVDFDQQ YLQIDLNVDG KEMEALIDTL VEQKLREMIT EDQKTAFERD VLSQNIENRI
TQESPHVKSG EVKDSPVLLK MITGKDHPTD QEIDAAVAAL KQNATISRTP SKMPDTDTVS
LRVSLPAGGM QRKAMAYRPY VKSYANERGL NEALVFAVIH TESAFNPMAR SHVPAYGLMQ
IVPQSAGRDA AQLLFGRQVL LSPSYLYSEQ NNINVGTAYL YILYNRYLRE ITNPTSRMYC
AIAAYNTGAG NVARAFTGTT SVSRAAQAIN RMSPQQVYTH LIQRLPHQET RDYLQRVTSR
MTMYQSM
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