| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2176 |
|---|
| Symbol | |
|---|
| ID | 5695022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2642259 |
|---|
| End bp | 2644049 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641264780 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001530057 |
|---|
| Protein GI | 158522187 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATT CTGTGGAAGG AAAGTCAAAC ATGGACAAAG ACCGTTTGAT CATCGCCAAT
TGCAGCGGTT TCCTGGGAGA CCGGTTTTCG GCGGCCGAGG AGATGGTCAC CGGCGGCAGG
ATTGACGTGC TCACCGGCGA CTACCTGGCC GAACTGACCA TGGCCATTTT GTTCCGGCAG
AAAATGAAAA AGCCGGAAAC CGGTTATGTG AGCACCTTTT TAAAACAGAT GAAGGTTGTC
ATGGGCCTGT GTCTGGAAAA GAAGATTCGG GTGGCCTCCA ATGCCGGCGG GCTCAATCCC
CGGGGCATGG CTGCGGCCCT GGCCGAACTG GCCAAAGAAC TGGGTCTCTC CCCGAAAATC
GCCTGGATCG AGGGAGATGA CCTGATGCCC CGGTTAAAAG AGCTGCAGGC CGCCGGGGAA
CCGTTTGTCC ACCTGGACAA AGGCATTGCC CTGGCCGACG GCGGGGGCAT GCCGGTTTCG
GCCAACGCCT ACCTGGGCGG GTGGGGCATC ACCGAGGCCC TGAAGCGCGG CGCCGACATC
GTGGTATGCG GCCGGGTCGC GGACGCGGCC CTGGTTTCCG GTCCCTGCGC CTGGCATTTC
GGCTGGGCGA CAGACGACTG GGACCGGCTG GCCGGGGCCT ATGCGGCGGG CCACGTGATC
GAGTGCGGCG CCCAGGCCAC GGGCGGCAAC TACGCCTTTA TGGACGAGGT GCCCGCCTAT
TCAAAGATCG GGTTTCCCCT GGCGGAGATG TATGCGGACG GGTCTTCCGT TATCACCAAG
CATTCAGGCA CCGGCGGCCT GGTTTCCGTG GGAACGGTGA CGGCCCAGCT GATGTATGAA
ATCCGGTCTC CCGCCTACCT GACCCCGGAT GTCACGGTGC GGTTCGATAC CCTGACCCTG
ACGCCCGACG GCGACAACCG GGTCCGCCTG TCCGGGGTCC GGGGCGAACC GGCCACCGAT
ACCACCAAGG TGTGCATTAA CCTGGTGTCC GGGTATCGCA ACACCATGAC CGTGGTACTC
ACCGGCCTTT CTATTGAAAA AAAGGCCCGC ATCGTGGAAC AGACCCTGTG GGAAAACCTG
GGTGGAAAGG AGCGGTTCGG CACGGTCCAT GTGCAGCTGG TCCGTTCGGA CAAACCGAAC
CCGCCCACCA ACGAGGAGTC CTTTGCCTTT CTGCGGATCA CGGTGATGGA TGACAACCCG
GCCCTGGTGG GCCGGGAGTT TTCCGCCGGG GTGGTGGAAC TGGCCCTGGC CAGTATTCCC
GGGTTTACCC TGACCAGCCC GCCCACGCCG GAATCGCCGG CGGTATTTCA CTGGCCGGCC
CTGGTGGGGA AAAAACAGGT TCCCCAGACC GTTTATATTG ATGATCAGCC GGTCATCGTG
GCATCAGCTG TTGACACCGT TTCCGGGGAT GGAATTTCAG CCCCGGTCTT TGATTTCCCC
GAACCGCTCG GCGGGCCGGT GCAGCCGGTT CCCCTGGGCA GGCTGTTTGC CACCCGGGCC
GGCGACAAGG GCGGCAACGC CAACCTGGGC GTGTGGGCAA AAACCCCGGA GGCGTTTGCT
TTCTTGAGGA CGTTTCTGAC CACGGAATGT TTGAAAAGCC TGCTGCCGGA CATCGGCCCC
TTTGAGGTGG AGCGGTATGA GCTGGCCAAC CTGCTGGCCG TTAATTTTTA TATCAGGGGG
CTGCTGGGTG AGGGTGCGGC CGCGTCCTGG CGCAGTGACC CCCAGGCCAA GACCCTGGGA
GAGTACCTGC GGGCCAGGAT CATCGATGTA CCGTCAGCCC TGCTGGATTG A
|
|---|
| Protein sequence | MEDSVEGKSN MDKDRLIIAN CSGFLGDRFS AAEEMVTGGR IDVLTGDYLA ELTMAILFRQ
KMKKPETGYV STFLKQMKVV MGLCLEKKIR VASNAGGLNP RGMAAALAEL AKELGLSPKI
AWIEGDDLMP RLKELQAAGE PFVHLDKGIA LADGGGMPVS ANAYLGGWGI TEALKRGADI
VVCGRVADAA LVSGPCAWHF GWATDDWDRL AGAYAAGHVI ECGAQATGGN YAFMDEVPAY
SKIGFPLAEM YADGSSVITK HSGTGGLVSV GTVTAQLMYE IRSPAYLTPD VTVRFDTLTL
TPDGDNRVRL SGVRGEPATD TTKVCINLVS GYRNTMTVVL TGLSIEKKAR IVEQTLWENL
GGKERFGTVH VQLVRSDKPN PPTNEESFAF LRITVMDDNP ALVGREFSAG VVELALASIP
GFTLTSPPTP ESPAVFHWPA LVGKKQVPQT VYIDDQPVIV ASAVDTVSGD GISAPVFDFP
EPLGGPVQPV PLGRLFATRA GDKGGNANLG VWAKTPEAFA FLRTFLTTEC LKSLLPDIGP
FEVERYELAN LLAVNFYIRG LLGEGAAASW RSDPQAKTLG EYLRARIIDV PSALLD
|
|---|
| |