| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2159 |
|---|
| Symbol | |
|---|
| ID | 5695005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2618915 |
|---|
| End bp | 2619508 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641264763 |
|---|
| Product | SirA family protein |
|---|
| Protein accession | YP_001530040 |
|---|
| Protein GI | 158522170 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0425] Predicted redox protein, regulator of disulfide bond formation |
|---|
| TIGRFAM ID | [TIGR03527] selenium metabolism protein YedF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000102186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCA TCGACGCCCG GAATCTGGCC TGCCCGGGAC CGGTTTTAGC GGCCAAGGCC
TTTATTGAGC AGAACGACCC CAACCGCATC ACCATTGTGG TGGACAATGA AGCAGCCCGG
CAGAATGTCG AACGTTTTCT GTCCAGCCAG GGGTACGACA TGCAGGTGGA ACAATCAGAC
GACACATGGA CCATCACCGG TATTCGCAAA TCCGGCGCTG CCTTTCAGGA AGAAAAAATT
CCGGTCCGGG AGCACGGGAG CGCCACCCTG GTGCTGATTT CATCGGACCG GCTGGGCCGG
GGCGACGACG ACCTGGGCGA AAAACTGATG GCCAGCTTCA TCAAGACCTT GGAAGAGATG
GGCACCGATC TCTGGCGCCT TGTATTTGTC AACAGCGGGG TCCGGCTGAC CATTGACGGT
TCCGCCGTTC TGCCGGACCT TCAAAAATAT GAAGCCGCGG GAACTCGACT GCTGGTCTGC
GGCACCTGCC TGACCCATTT TGACCTGATG GACCGGAAGC AGGTGGGGCA GACCACCAAC
ATGCTGGACA TCGTCACCGC CATGCAACTG GCGGAAAAGG TGATCGTGAT CTGA
|
|---|
| Protein sequence | MTPIDARNLA CPGPVLAAKA FIEQNDPNRI TIVVDNEAAR QNVERFLSSQ GYDMQVEQSD
DTWTITGIRK SGAAFQEEKI PVREHGSATL VLISSDRLGR GDDDLGEKLM ASFIKTLEEM
GTDLWRLVFV NSGVRLTIDG SAVLPDLQKY EAAGTRLLVC GTCLTHFDLM DRKQVGQTTN
MLDIVTAMQL AEKVIVI
|
|---|
| |