| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2157 |
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| Symbol | |
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| ID | 5695003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2616755 |
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| End bp | 2617873 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641264761 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001530038 |
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| Protein GI | 158522168 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000200238 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATA CAGCAGCAAC AGCAGACAGG CAGCAGACCC TGCGAATACG CCGGTTCCTG
ATGGCCTGTG CCTCATACCT GCTGTGGGGA ATCATATGCA TCTGCGCCTA TTACGTTGGG
CTGATGCGTA TCACCATGGG TGTTTTGCTT GGACTGGGGT TTCTGGCGTT CCTGGTCAAC
CTCGCTTTTT ACGGGCTGTT TGCTTCCGGT CTGAACAGAC GGCTCAAAGA TCCCAGCCTG
ACCGCCGCGC AGATGATCAG CGGCATCCTG TGGGTCACCA TCATGGGCTA CTGCTCGCAC
ACGTCATTGC GGGGGAGCTA TATCGCCCTC TACCTGATCG TTTTTGTGTT CGGCGTGTTC
AAGCTCCGAC TGCGGACCTT TTTCGTACTC ACTTTTGTTG CCGCGGGCTC ATACGGGACC
TCCATGCTGC TGCTGGCGGT CAATGCGCCG GACGCGGTCG ACCCCCACCT TGAAATCACC
CGGACGGTGC TGCTGCTGGC CGTTCTGATG TGGTTCTCGC CGCTGGGCTA CTACATCTAC
AACCTGCGCG CCAGGGCGGT GCAGGCCAAT GTGGAACTCA AAGAGGCCCT GGGCACCATT
GAACAGCTGG CCGTGCATGA CGAGCTGACG AACGTCTATA ACCGTCGCCA GATGTTCCGC
GTACTAAACC GGGAAAAAGC CTTTGCCGAC CGGACGGGCA TGCCCTTTGT TGCCTGCCTG
ATGGACCTGG ATGATTTCAA GCTCATCAAC GACACCTATG GTCATCTCTC CGGCGACACC
ATTCTCAGGG CCTTTGCCCA GACGATCAAG CATGATATCC GACGGGAGGA TTACATCTTC
CGGTACGGCG GCGAAGAGTT CCTGGTTGTT TTTACCGGGA CCCGCTGTCT TGCCAACAGC
GCCGACTGTG CCCAGCGGCT GCGGGCGGCA ACAGCCCGCC TCGCCTTCCC CGACATTTCC
GATCAGGTCC GGGTGACCAT CTCCATCGGC ATGACCACCT ACGAGCCCGG GGAAACCATT
GACAGCCTGC TCTCCAGAGC CGACGCGGCC CTTTACAAGG CCAAGAAAAA CGGAAAGAAC
CGGGTGGAAT ATACTGCGCC ACCCCGGCGG ACACCATAA
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| Protein sequence | MMDTAATADR QQTLRIRRFL MACASYLLWG IICICAYYVG LMRITMGVLL GLGFLAFLVN
LAFYGLFASG LNRRLKDPSL TAAQMISGIL WVTIMGYCSH TSLRGSYIAL YLIVFVFGVF
KLRLRTFFVL TFVAAGSYGT SMLLLAVNAP DAVDPHLEIT RTVLLLAVLM WFSPLGYYIY
NLRARAVQAN VELKEALGTI EQLAVHDELT NVYNRRQMFR VLNREKAFAD RTGMPFVACL
MDLDDFKLIN DTYGHLSGDT ILRAFAQTIK HDIRREDYIF RYGGEEFLVV FTGTRCLANS
ADCAQRLRAA TARLAFPDIS DQVRVTISIG MTTYEPGETI DSLLSRADAA LYKAKKNGKN
RVEYTAPPRR TP
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