| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2154 |
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| Symbol | |
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| ID | 5694999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2614848 |
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| End bp | 2615603 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264757 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001530035 |
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| Protein GI | 158522165 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.870647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTTA TTCCCGCGGT GGACATCAAG GGCGGTAAGT GTGTCCGGCT GTTGCAGGGA
GACATGAACG CGGAGACCGT GTTTTCCGAT GATCCGGGTG CCATGGCCGA ACGCTGGGCC
GAAGCGGGCG CCGAACTGAT TCACGTGGTG GACCTGGACG GCGCCATTGA AAAAAGCCCG
CGGAACCTGA AAGCGATCAG CGCCCTTATT CGCCGGGTGG GGGTTCCGGT ACAGGTGGGC
GGCGGCATTC GGGAGATCGA CACGGTAAAG ATGTACGCCG ATCTGGGTGT TGCCAGAATC
GTGATCGGGT CGGCGGCGGT AAACCACCCC GACCTGGTGA CAGCGGCCTG CCGTGAGTTT
CCGGGCCGGA TCGTTCTGGG CATTGATGCC CGGGACGGCC GAGTGGCCAC CGAAGGGTGG
ACCAGCACCA CCGATATTGC CGCGGCTGAT CTCGCGGCAC GGTTTGAAGG GTGCGGAGTG
GCGGCGATTA ATTTTACCGA TATTCACAGG GACGGAATGC GGACGGGTCC CAACATTCCG
GCCATTGAGG CGTTTGCCCG GGCCACCGCC ATTCCGGTGG TGGCTTCCGG CGGCGTTTCC
ACCATCGACG ACATTCAGGC CCTTTTGGGT ATTCAAGAAT TTGGCGTGAC CGGTGTGATC
ACGGGCAGGG CCCTGTATGA CGGCACCCTG GATCTGGCAG AGGCCATTGC CGTGGCATCG
GCCGGGGACT CAACCTCACA AAAGAGCGTT GGCTGA
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| Protein sequence | MMVIPAVDIK GGKCVRLLQG DMNAETVFSD DPGAMAERWA EAGAELIHVV DLDGAIEKSP
RNLKAISALI RRVGVPVQVG GGIREIDTVK MYADLGVARI VIGSAAVNHP DLVTAACREF
PGRIVLGIDA RDGRVATEGW TSTTDIAAAD LAARFEGCGV AAINFTDIHR DGMRTGPNIP
AIEAFARATA IPVVASGGVS TIDDIQALLG IQEFGVTGVI TGRALYDGTL DLAEAIAVAS
AGDSTSQKSV G
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