Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2132 |
Symbol | |
ID | 5694975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2587981 |
End bp | 2588718 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641264733 |
Product | ABC transporter-related protein |
Protein accession | YP_001530013 |
Protein GI | 158522143 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.76673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAGA TCAAACACCT GAATAAGCGA TTCGGCGATT TTACGGCCCT TTCCGATCTG TCGCTTTCCG TGGCAAAGGG CGAGCTGTTC GGATTTATCG GCCCCAACGG CGCGGGCAAA ACCACCACCA TCCGCATTCT GGGCGGTATC CTGGCCCCCA CGTCGGGCAG TGTCCATGTG TGCGGCATCG ACATGGCAGC CGAACCGGAA ACGGCCAAAG CAAAAATCGG CTTTATTCCG GACCGGCCCT ACCTGTATGA AAAGCTCACG GCCATGGAGT TTCTGCGCTT TACCGCCGAT CTTTACAACG TTCCGGGTGC CGGGTTTTCC AAAAAGGCCA TGGGAATGTT GCGGCAATTT TCTCTGGAAA ACTGGAGCGA CACCCTGATC GAGTCCTTTT CCCACGGCAT GAAGCAGCGG CTGATCATGG CCAGTGCCCT GCTGCACGAC CCCGAGGTGT TGATCGTGGA CGAGCCCATG GTGGGGCTGG ACCCGGCGGG CATCAAGATG GTAAAAAGGC TTTTCCGGGA GATGGCGGCG GCCGGGGTGG CGATTTTCAT GTCCACCCAC ACTCTGTCCG TGGCCCAGGA GGTGTGCGAC CGTGTGGGGG TGATTCACAA GGGCCGGCTC ATTGCCACGG GTGACATGGA CGACCTGACC CGGCAGGCCC ATGCCGAGCG CACCGACCTG GAAGAGGTTT TTTTTCGGTT GACCCAGGAG GAGAGCCTGA ATTATTAA
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Protein sequence | MIEIKHLNKR FGDFTALSDL SLSVAKGELF GFIGPNGAGK TTTIRILGGI LAPTSGSVHV CGIDMAAEPE TAKAKIGFIP DRPYLYEKLT AMEFLRFTAD LYNVPGAGFS KKAMGMLRQF SLENWSDTLI ESFSHGMKQR LIMASALLHD PEVLIVDEPM VGLDPAGIKM VKRLFREMAA AGVAIFMSTH TLSVAQEVCD RVGVIHKGRL IATGDMDDLT RQAHAERTDL EEVFFRLTQE ESLNY
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