Gene Dole_2131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2131 
Symbol 
ID5694974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp2587140 
End bp2587766 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content58% 
IMG OID641264732 
Producthypothetical protein 
Protein accessionYP_001530012 
Protein GI158522142 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.605971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGAAA GCGTTTTCAA AAAAATTCAC TGGCTGGGGC ACGACGGATT CCGCATCGAC 
GGCGAGCAGG TCATCTATAT CGATCCCTAC CAGATCGCGG GCGGGCCGCC GGCCGGCCTG 
GTACTGATCA CCCATGAACA TTTCGACCAT TGCAGTCCGG AGGATGTGGC AAGGATCCAG 
AACCCGCAAA CCGTTATCGT TACGGAAAAG GATTCAGCGG CAAAGCTGTC CGGCGACATT 
CGGACCGTTG CGCCCGGAGA CCGCCTGACC GTGGGAGGCG TGGCCATCGA AACGGTGCCG 
GCCTACAACA CGGACAAGGA TTTTCATCCA AAGGCCAAAG GGTGGCTGGG TTTTGTTTTT 
GAGGTGGATG GCGTACGGAT TTATCATGCC GGTGACACGG ACCGCATTCC CGAGATGGAT 
AGGATTCAGG CCGATATCGC GCTGCTGCCG GTGTCCGGCA CCTACGTGAT GACCGCGGCC 
CAGGCGGTGG AAGCGGCCCT GGCTGTTAAA CCGAAGATTG CCGTCCCCAT GCACTACGGC 
GCCGTGGCCG GCACCGCCGA CGATGCCCAG GCATTTAAAA AGGCCCTTGA GGGTAAAGTG 
GATGTGCGGA TTTTGTCAAA AGAGTAG
 
Protein sequence
MVESVFKKIH WLGHDGFRID GEQVIYIDPY QIAGGPPAGL VLITHEHFDH CSPEDVARIQ 
NPQTVIVTEK DSAAKLSGDI RTVAPGDRLT VGGVAIETVP AYNTDKDFHP KAKGWLGFVF 
EVDGVRIYHA GDTDRIPEMD RIQADIALLP VSGTYVMTAA QAVEAALAVK PKIAVPMHYG 
AVAGTADDAQ AFKKALEGKV DVRILSKE