Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2117 |
Symbol | |
ID | 5694960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2571066 |
End bp | 2572307 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641264718 |
Product | Na+ dependent nucleoside transporter |
Protein accession | YP_001529998 |
Protein GI | 158522128 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000427542 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACAAA GCCTTCTGGG CCTTGGGGCC TTTGTTCTGA TGGCCTGGCT GATCAGCGAA AACCGTTCTT CGGTCCGGCT CAAAACCGTG GCCGCGGGCG TGGGCCTGCA ACTGGCACTC GGCGTCCTTC TGCTCAAAAC ACCGGGCACC ACCGACCTTT TTCTCATGTT AAACAAAATC ATCCTGGCCG TGGAGACATC CACCCGGGCC GGCACCGCCA TGGTGTTCGG CTACCTGGGC GGAGGCGACC GGTTTCCCTT TGCCGTCACC GACCCCGGCG CCACCTTTAT GCTGGCTTTT CAGGCCCTGC CCCTGGTGCT GGTGATGAGC GCGCTTTCCG CCCTGTTTTT CTACTGGAAG ATCCTGCCGG CCGTGGTGCG GGGCTTTTCC TGGGTGCTGC AAAAAACCGC GGGCCTGGGC GGCGCCGAAG GCGTGGGCCT GTCGGCCAAC ATCTTTGTGG GCATGGTGGA GTCCCCCCTG CTGATCCGGC CCTACCTGGC GAACATGACC CGCAGCGAAA TATTTTCCAT CATGACCTGC GGCATGGCCA CCATTGCCGG CACCGTGATG GTGCTGTATG CCAGCATTTT AGGTCCCGTG ATTCCCAATG TGATGGGCCA TATCCTGACC GCCTCGATCA TCAGCGTGCC CGCGGCCATC ACCATTGCCA AGATACTGGT GCCGGAGACC AGCCAGCCCA CGGCCGGCCG CCTGGACCCG CCCCAGACGG CCGACAGCGC CATGGACGCG ATCACCAAAG GGACCCTTCA GGGCATCGAA CTCCTGATCA ACATCGTGGG CATGCTGATC GTGCTGGTGG CCCTGGTCAC CCTGGTCAAC CTGCTGTTGG AATTTCTGCC CGACGCCTGG GGGGCGCCGC TTACCCTTCA GCGGCTTCTG GGTTTTTTAA TGGCGCCGGT GGTCTGGTTG ATGGGCATTC CCTGGGATCA GGCCCCCACG GCCGGGGCAC TGATGGGCAC CAAGACCGTT TTAAATGAAC TGCTGGCCTA CCTTGAAATG AGCGGGCTGC CCAAAGGCGC TCTTGACCCG AAAAGCCTGC TGATAATGAC CTATGCCATG TGCGGGTTTG CCAACCCCGG CAGCTTGGGC ATCATGATCG GAGGCCTGGG CACCATGGCG CCGGAGCGGC GCCCGGAGAT CGTCTCCCTG GGCCTTCGTT CCATCGTGGC CGGCACCCTG GCCACCTGCA TGACCGGCGC CGTTGTGGGT CTCCTGATGT AA
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Protein sequence | MIQSLLGLGA FVLMAWLISE NRSSVRLKTV AAGVGLQLAL GVLLLKTPGT TDLFLMLNKI ILAVETSTRA GTAMVFGYLG GGDRFPFAVT DPGATFMLAF QALPLVLVMS ALSALFFYWK ILPAVVRGFS WVLQKTAGLG GAEGVGLSAN IFVGMVESPL LIRPYLANMT RSEIFSIMTC GMATIAGTVM VLYASILGPV IPNVMGHILT ASIISVPAAI TIAKILVPET SQPTAGRLDP PQTADSAMDA ITKGTLQGIE LLINIVGMLI VLVALVTLVN LLLEFLPDAW GAPLTLQRLL GFLMAPVVWL MGIPWDQAPT AGALMGTKTV LNELLAYLEM SGLPKGALDP KSLLIMTYAM CGFANPGSLG IMIGGLGTMA PERRPEIVSL GLRSIVAGTL ATCMTGAVVG LLM
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