| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2106 |
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| Symbol | |
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| ID | 5694949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2558731 |
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| End bp | 2560452 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641264707 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001529987 |
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| Protein GI | 158522117 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00306237 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGGA ATATAAACAC CAGACAACCC GATCCCTCGG CCGTTACCGC CATTGCAAAG
GCCCTGCCCT GCTCGGACAT TGCCGCGTCC CTGCTGGTCA ATCGGGGCAT TCTATCGGTA
AAACAGGCCC GGCACTTCCT GTCCGCCACC GTGGCCGACC TGCCCTCTCC CTTTTCCATG
AAAGGTATAG ACACGGCCGT GGCCCGCATT CACTCGGCCC TGATCAACCA TGAAACCATC
CTGGTGTTCG GCGATTATGA TGCTGACGGC ATCACCGCCA CCGCTCTTCT GGTGGGGTTC
CTCACACAGG CCGGTGCAAC GGTCCGGCAT CACCTGCCCC ACCGGATTCT GGAGGGGTAC
GGTCTCAAGC CCCGGCACAT CACCGAGGTT GCCGCCACGC ACAAGGCCTC GCTGCTGATC
ACCGTGGATT GCGGCATCAC CAGCCATGCC GCGGCCCTGG CCTGCCGGGA GGCGGGTATT
GACCTGATCA TCACCGACCA TCACCAGGCA CCGGCCGAAC CGCCTACGGC CCTGGCCGTG
ATCGACCCGG CCCAGGCCGG CTGCCCGTCG GGCCTGGGCG ATCTGGCCGG CGTGGGCGTG
GCCTTCTACC TGCTGATCGC CCTGCGGGCC TTTCTGCGAG AAAAGGGGTT CTGGAAAACC
CGGCCCGAGC CCAACCTCAA GGCCTGCTGT GACCTGGTGG CCATCGGCGC CATCGCCGAT
ATCGTTCCCC TGACCGGCGA AAACCGGATT CTGGTCAGAA CCGGCCTGGA ACTGCTCCGC
ACCCCCTCCC GGCCGGGTAT AGAGGCATTG ATTGCCGGCG CAAAGATCAA AAAACCGGCC
CTTTCCGCCG AAGACGTGGC CTTTCGGCTG GCTCCCCGGC TTAACGCGCC GGGCCGGATC
GACCATGCCG CAACAGCCCT GGAACTGCTG CTGGCCGAAA CAAAGGAGGT CGCCGTAAAA
ATAGCGGGCC GGCTCAACCG GCTCAACACC AAACGGCAGA TGATTGAAGA GGAGATTTCG
GGTGAGATTC AGCAGATTGT CAATGATCGC ATCAACACCA TCAAGGAACG GCGTTCCCTG
GTACTGGCCC ATCGCCAGTG GCACCAGGGT GTGATCGGCA TCGCCGCGTC ACGGGCCGCG
CGGCGCTACA GCCTGCCCGT GGCCCTGATC ACCATTTCCG GAGACATGGG CATCGGATCG
GCCCGCAGCA TCCCCGGCCT TCACCTTTAC GACGCCCTCA AGGGATGCGC CCGGCTCTTC
GAGGACTTCG GGGGCCACGC CCAGGCCGCG GGTTTCCGCA TTCGCATGGA GAACCTGGCC
GCGTTTGAGA CACAGTTTGA GTATATTGTG CGGCAGCAGA CCACACCCGG CGACTTTGTC
CCGGCCGTTG AGGTAGACTG CGAGCTGGCC ATGGACCGCA TCACTAACAC CCTGGTCCGG
GAGATCGAAG GGCTTTCCCC CTTTGGCGCC GGTAACCCGG AGCCGCTGTT TTCAGCCCGC
AATGTACGGG CCAGCGACAC CTTCATGATC AACGGCCGGC ACCGGAAAAT GACCCTGGCC
CACCCCGGAA CGGACAGGGG TATTGCCGCC ATCTGGTTCA ACACCCCGGC ATCACATCAG
GAGTCCTCTT TTTTCAGACG AATCCTCTTC CGGCTGCGGC AAGACACCTG GAACGGCTCC
GGCGCCCCGC AAATCATCAT TGAAGACGCC TTTGCCGAGT AG
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| Protein sequence | MTRNINTRQP DPSAVTAIAK ALPCSDIAAS LLVNRGILSV KQARHFLSAT VADLPSPFSM
KGIDTAVARI HSALINHETI LVFGDYDADG ITATALLVGF LTQAGATVRH HLPHRILEGY
GLKPRHITEV AATHKASLLI TVDCGITSHA AALACREAGI DLIITDHHQA PAEPPTALAV
IDPAQAGCPS GLGDLAGVGV AFYLLIALRA FLREKGFWKT RPEPNLKACC DLVAIGAIAD
IVPLTGENRI LVRTGLELLR TPSRPGIEAL IAGAKIKKPA LSAEDVAFRL APRLNAPGRI
DHAATALELL LAETKEVAVK IAGRLNRLNT KRQMIEEEIS GEIQQIVNDR INTIKERRSL
VLAHRQWHQG VIGIAASRAA RRYSLPVALI TISGDMGIGS ARSIPGLHLY DALKGCARLF
EDFGGHAQAA GFRIRMENLA AFETQFEYIV RQQTTPGDFV PAVEVDCELA MDRITNTLVR
EIEGLSPFGA GNPEPLFSAR NVRASDTFMI NGRHRKMTLA HPGTDRGIAA IWFNTPASHQ
ESSFFRRILF RLRQDTWNGS GAPQIIIEDA FAE
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