| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2096 |
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| Symbol | |
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| ID | 5694939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2546043 |
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| End bp | 2548712 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641264697 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_001529977 |
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| Protein GI | 158522107 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAT CGGAACGGAC AACCAGAAAA AAAAGAATTG ATACCCGGCT CTCATCCTCG
TTATTGAACT GGACTATTAT TCATAACGAT GATGTTACAG ACCAATCTCT GCTGACCCAC
CACGCCGTTG AAGAATATTC CACCAAAACC GGCCCGGCCG ATTATGCCTT GTTTGTTGAC
GGTAAGTTGC TGGGCATTAT CGAGGCCAAA AAAATCGCCG TCGGCGCCGG TAATGTACTG
GAACAGGCCA AACGATATTC AAAGGGGGCG CCCGATTCCA TCGGTGATTG GCGCGGCTAT
AAAGTTCCTT TTCTCTATTC CACCAACGGC GAATTGATTT TCCACCTTGA TGTGAGAAAC
AATCAAAACA CCGCTTGTCG GTTGATTGAT TTTCATTCGC CCCGGGCACT GCTGGACAAG
TTTAACCGGG ATACCCAAAG CGCGGAGGCC TGGCTGGCGG AAAAACCCAT TGAAGATATC
ACCCGACTGC GTCCCTACCA GAAAGAGGCC ATCGCCGCTA TCGAAACGGC CATTGGCAAT
GGGAAAAAGA CCATGCTGGT TGCCATGGCC ACCGGTACGG GCAAAACCTT TACGCTGGTG
TCTTCTATTT ATCGTCTTTT AAAGTCCGGA TATGCCAGAC GCATCCTTTT CCTGGTGGAC
CGCCGGTCTC TGGCTGCCCA GGCCGTCCAG GCCATTTCAT CGTTTGAAAC GCCGGAAGGC
CTGAAGCTGG ATAATGCCTA TGAAGTATAC AGCCAGAAAT TCCGGCGGGA TGATTTTGAC
GATGAGAACA ATTTTGACCC GAAAGTACTG CCCGAGGCGT ATCTGACTGA TCCCCAGGAA
AAGCACACCT TTATTTACGT CTCCACCATC CAGCGAATGT CCATCAACCT TCTGGGCAAA
GAAGCGGTCG GTGACTTTGA ATATGAGGTG GACGCGGGCA AGCTTGATAT CCCCATTCAT
GCCTTTGATG TGATTATTGC CGACGAATGC CATCGCGGCT ACTCCGCCAG AGAAACCGGC
CGGTGGAAAT ACGTGCTGGA TTATTTTGAC GCAGTCAAAA TCGGCCTCAC AGCCACCCCG
GCCACTCATA CGTTGGCCAT GTTCAAGCAC AAGGTGTTTA GCTACAGCAC CGAACAGGCG
GTGCTGGACG GCTTTCTGGT GGATTACGAG GCCGTTAAGA TTAAATCCGG TATTCATATT
AACGGCGCCT TTTTAAAAGA AGGGGAGCTG GTCGGCGTTA TCGACCGGGA AAGCGGCGCT
GAAAAGCTGG ATGAACTGGA AGATGAGCGG GAATTCGTGG CCACTGAGAT TGAGGTCAAG
ATCACCTCGC CGGACAGCAT CAAAAAGATT ATTTCCGCGC TTAAGAAATA TACGGATGAA
CATGAAAAGG AAAATAACCG TTTCCCCAAA ACCCTGATTT TTGCCGTCAA CGACTTGCCC
CATGTGTCCC ATGCCGACGA GATAGTCAAA ACCTGCAAGG AGGTGTACGG CCGGGGAGAC
GACTTTGTCA TGAAGATCAC CGGCAGCCCC ACCGTCGATC GCCCCCTTCA AAAGATCCGG
CAGTTCCGCA ACCGGCCGGA ACCCAATATC GTCGTCACGG TGGACATGCT GACCACCGGC
GTGGATATCC CGGCCATTGA AATGGTGGTG TTCATGCGCA TGGTCAAGTC CCGCATTCTC
TGGGTGCAGA TGCTGGGCCG GGGCACCCGG CTGTGTGAAG AAATCCACAA GGAAAAATTT
ACCATCTTCG ACTGCTTTGA CGGTTCGCTC ATCAAATACT TTAAAGACGC TACCGACTTT
AATGTCAGCC TGCAACGGGA AGCAACGCCG CTGTCCGAAA TTATCGAAGC GATCTACGAT
AACCAGGACC GGGAATACAA CATCAACCGG CTTATCAAGC GACTCCGCCG AATCGAAAAA
AACATGGGCG CCGAAGCCCG GGAGGCCTTT ACCAAATATA TTCCCGCCGG CGACATGAAG
GCCTTTGCCG ACCGGCTGAA AGACAATCTG GCCGAGCAAT TTACCGAAAC CATGAAACTG
CTGCGCGATA AAGATTTTCA GGACCTGCTG CTCAACTATC CCCGCCCGAA AAAAGTCTTT
TTTAAAGGAT ATGACATTGT CGATACGGTG GAACACGAGG TCATGTTCCG GGTGGGCGGC
GACTATCAGA AACCCGAAGA CTATCTCAAA CTGTTTGAAG AATTTGTCCG GCGCAATCCG
GAACACATCG ACGCTATTGA CATCCTCTTG TCCCGGCCCA AACAGTGGGG CACCGACGCC
CTGGACGAGT TGCGAAAGCA GTTGCGGCAA AGCGATTTTT CGGAAAAAGA CCTGCAGCGC
GGCCATGCCC TGGTTTACAA AAAGCCGCTG GCCGATATCA TCTCCATGAT CAAGCACGCC
TCGGACTATG ATGTACCGAT TTTAACGGCC GCCGAACGGG TGGACGCCGC CGTGGAAAAA
ATTGTCCGCA ATCACGATTT TAATGATGAC CAGCGTGCCT GGCTGGCCTA TATTAAAGAG
CATTTAATTG AAAACCTGGC CATTGCCGAA GAGGATTTTG CCCTCATGCC GGTCTTTGAA
CGTCAAGGCG GCATCGGCGC CGCCCGGCGG GTATTCGGCG ACAGGTTTGA ACCGCTTATC
TGCGAACTCA ACGAAGCCCT GGCTGCGTAA
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| Protein sequence | MTESERTTRK KRIDTRLSSS LLNWTIIHND DVTDQSLLTH HAVEEYSTKT GPADYALFVD
GKLLGIIEAK KIAVGAGNVL EQAKRYSKGA PDSIGDWRGY KVPFLYSTNG ELIFHLDVRN
NQNTACRLID FHSPRALLDK FNRDTQSAEA WLAEKPIEDI TRLRPYQKEA IAAIETAIGN
GKKTMLVAMA TGTGKTFTLV SSIYRLLKSG YARRILFLVD RRSLAAQAVQ AISSFETPEG
LKLDNAYEVY SQKFRRDDFD DENNFDPKVL PEAYLTDPQE KHTFIYVSTI QRMSINLLGK
EAVGDFEYEV DAGKLDIPIH AFDVIIADEC HRGYSARETG RWKYVLDYFD AVKIGLTATP
ATHTLAMFKH KVFSYSTEQA VLDGFLVDYE AVKIKSGIHI NGAFLKEGEL VGVIDRESGA
EKLDELEDER EFVATEIEVK ITSPDSIKKI ISALKKYTDE HEKENNRFPK TLIFAVNDLP
HVSHADEIVK TCKEVYGRGD DFVMKITGSP TVDRPLQKIR QFRNRPEPNI VVTVDMLTTG
VDIPAIEMVV FMRMVKSRIL WVQMLGRGTR LCEEIHKEKF TIFDCFDGSL IKYFKDATDF
NVSLQREATP LSEIIEAIYD NQDREYNINR LIKRLRRIEK NMGAEAREAF TKYIPAGDMK
AFADRLKDNL AEQFTETMKL LRDKDFQDLL LNYPRPKKVF FKGYDIVDTV EHEVMFRVGG
DYQKPEDYLK LFEEFVRRNP EHIDAIDILL SRPKQWGTDA LDELRKQLRQ SDFSEKDLQR
GHALVYKKPL ADIISMIKHA SDYDVPILTA AERVDAAVEK IVRNHDFNDD QRAWLAYIKE
HLIENLAIAE EDFALMPVFE RQGGIGAARR VFGDRFEPLI CELNEALAA
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