| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2074 |
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| Symbol | |
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| ID | 5694917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2525989 |
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| End bp | 2527365 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641264675 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001529955 |
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| Protein GI | 158522085 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCCC GGAAAATTTT TCTGACAGAA GATGAGATGC CGCGCCAGTG GTACAACATT
CTGGCGGACA TCAAGATGAA TCCGCCGCTG GGACCCGACG GCAATCCCGT GGGACCCGAT
TCCCTGGCCC CTGTGTTCCC CATGAACCTT ATCGAGCAGG AGGTCAGCAC CGAGCGGTGG
ATCACCATTC CTGACGAGGT ACTGGACATT CTGACGACGT GGCGGCCGTC CCCCCTGGTG
CGGGCCCGCA ATCTTGAAAA GGCGCTGGGA ACGCCGGCCA AGATTTACTA CAAGAACGAA
AGCGTCAGCC CTGCCGGAAG CCATAAGCCC AACACCGCTG TCGCCCAAGC CTACTACAAC
AAGGAGTTCG GCATCAAGAA GCTCACCACC GAAACCGGGG CCGGCCAGTG GGGCAGCGCC
CTCTCCTATG CCTGTTCCCA GTTCGGCCTG GAGTGCAAGA TATTCATGGT ACGGATCAGC
TTCGACCAGA AGCCCTACCG CAAAAGCATG ATGGGCGCCT GGGGTGGTAA CTGTATTCCC
AGCCCCAGCG ACCAGACCCG TGCGGGCCGC GACGCCCTGG CCAAAGATCC CAACACCCCG
GGCAGCCTGG GCATTGCCAT CAGCGAAGCC ATCGAATGTG CCGTCACCGA CGAATCGGGA
GAGACCCGTT ATGCCCTGGG CAGCGTGCTC AACCACGTGA TGCTGCACCA GACCATCATC
GGGCTGGAAG CCAGGAAACA GTTTGAAAAA GTCGGCGACT ATCCGGATGT CATCATCGGA
TGCGCCGGCG GCGGCAGCAA CTTTGCCGGC ATCGCTTTTC CCTTTGTCTA CGACAAGATT
CACGGCAAAG ATATTGAGAT TTACCCGGTG GAGCCCATGG GCTGCCCCAC CATGACCAAG
GCCCCCTTTG TTTACGACCA CGGCGATACC GCCAAGTACA CCCCCCTGCT GGCCATGCAC
AGCCTGGGTC ATGCCTTTGT TCCGCCGCCT TTTCACGCGG GCGGGCTCCG TTACCACGGC
ATGGCGCCCA CGGTCAGCCA GCTGGTCTGC GAAGGCATTG TTACCCCCCG GGCGGTTTCC
CAGTTGAGCA CCTTTGAGGC GGGCGTGCTG TTTGCCCGTT CCGAAGGTAT CATTCCCGCG
CCCGAGAGCA ATCACGCCAT CGCCTGTGTC ATTGAAGAGG CCAACAAGGC AAAGGAAGAG
GGCAAGGAAA AGGTGATCCT GTTCAACCTG AGCGGTCATG GCCTTCTGGA CCTGGCCGGA
TACGACCGGT TCTTTGCCGG CGAGCTGTCC AACATTCTCA TGAACGATGA TGATCTGAAG
GCGTCGGAAG CGGTGTTTGC CGATTATCCC AAGCCTGCGA TCCTCAAGCA CGATTAG
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| Protein sequence | MTSRKIFLTE DEMPRQWYNI LADIKMNPPL GPDGNPVGPD SLAPVFPMNL IEQEVSTERW
ITIPDEVLDI LTTWRPSPLV RARNLEKALG TPAKIYYKNE SVSPAGSHKP NTAVAQAYYN
KEFGIKKLTT ETGAGQWGSA LSYACSQFGL ECKIFMVRIS FDQKPYRKSM MGAWGGNCIP
SPSDQTRAGR DALAKDPNTP GSLGIAISEA IECAVTDESG ETRYALGSVL NHVMLHQTII
GLEARKQFEK VGDYPDVIIG CAGGGSNFAG IAFPFVYDKI HGKDIEIYPV EPMGCPTMTK
APFVYDHGDT AKYTPLLAMH SLGHAFVPPP FHAGGLRYHG MAPTVSQLVC EGIVTPRAVS
QLSTFEAGVL FARSEGIIPA PESNHAIACV IEEANKAKEE GKEKVILFNL SGHGLLDLAG
YDRFFAGELS NILMNDDDLK ASEAVFADYP KPAILKHD
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