Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2060 |
Symbol | |
ID | 5694903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2511579 |
End bp | 2512508 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641264661 |
Product | periplasmic binding protein |
Protein accession | YP_001529941 |
Protein GI | 158522071 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.182535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGT TTTTCTCAAT GCAGTTCCGC CGCATGGCGG TGGTAACAGC CCTTATAACG TTTTTGTGTC TGCCTGTGGC CTACGCGAAA ACAGTGACCG ACCCGACCGG CCGCACCCTT GAGGTGCCGG ACAGTCCGAG CCGCGTGGTG TCCCTGGCAC CCAGCATCAC GGAAATCATA TTCGCCTTGG AACGCCAGGA TGTTTTAAAA GGCGTCACCC AGTACAGCGA TTATCCGCCG GAAGCCCTGC AACTGCCCAG GGTGGGTTCT TATGTGCACC TGGACCTGGA ACGCATCGTG GCCCTGTCGC CGGACCTCTG CATCGCCATC AAGGACGGCA ATCCCAAGCA GGTGGCCGAC CGGCTCACCG AGCTGGGCAT TCCGGTCTAT GCCGTCAACC CCTTTGACCT GAACACGGTG ATCCAGACGG TCGAGGAGAT GGGCACGCTG CTCAATGCAA CGAAAAAGGC CGGGCAACTG GCCGACAGCA TGCGCGCCCG CATCAACCGC ATCGACCGGC TGGTGGCGTC AATCCCGCAC CGGCCGGCGG TCTTTTTCCA GATCGGCATC TCCCCCATTG TATCAGCCGG CACAGACACG TTTATCAATG AGCTGATCAC CCGGGCCGGA GGAAAAAACC TGGCCGCCGG TCAAACGCCC TATCCCCGAT TCTCCGAGGA GGAACTGGTG GGCCTTGCCC CGGACGTGGT GATCATCACC TCCATGACCC GGGACGGCGA GTTTGACAGA GCCATGGCCC AGTGGCGCAA ATGGGACACC CTGCCCGCAA TAAAAAGCAA CCGGATTCAC CTGATCGACT CCAACCTGGT GGACCGGCCC ACCCCCCGCA TCGTGGAGGG CCTGGAAACC CTGGCCCGGC TGATTCACCC GGAACTTTTC TCCGGCACCC CTTCAGAGGA TACACCATGA
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Protein sequence | MKQFFSMQFR RMAVVTALIT FLCLPVAYAK TVTDPTGRTL EVPDSPSRVV SLAPSITEII FALERQDVLK GVTQYSDYPP EALQLPRVGS YVHLDLERIV ALSPDLCIAI KDGNPKQVAD RLTELGIPVY AVNPFDLNTV IQTVEEMGTL LNATKKAGQL ADSMRARINR IDRLVASIPH RPAVFFQIGI SPIVSAGTDT FINELITRAG GKNLAAGQTP YPRFSEEELV GLAPDVVIIT SMTRDGEFDR AMAQWRKWDT LPAIKSNRIH LIDSNLVDRP TPRIVEGLET LARLIHPELF SGTPSEDTP
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