| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2029 |
|---|
| Symbol | |
|---|
| ID | 5694870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2458610 |
|---|
| End bp | 2459899 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641264628 |
|---|
| Product | adenylosuccinate synthetase |
|---|
| Protein accession | YP_001529910 |
|---|
| Protein GI | 158522040 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0104] Adenylosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00381049 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCAATA TCGTTGTGGT GGGAACCCAG TGGGGAGATG AGGGAAAGGG CAAGATCGTT
GACCTGCTGG CGGCGTTTGC CGATCTGGTG GTGCGGTTTC AGGGCGGTAA TAATGCCGGC
CACACCCTGG TGGTCAACGG GGAATCATTT ATCAGCCACC TGGTGCCCTC GGGCATTTTG
CAGGGCAAGA TGTGTCTGAT CGGCAACGGC GTGGTGGTGG ACCCGGCCGT GCTCACTGAG
GAGATGGCGG CCCTTCGCAG CCGGGGGGTG GCCGTGATCC CGGAAAAATT CAAAGTCAGC
GCCAGTGCCC ATATTATCAT GCCTTACCAC AAAACCATCG ATCTGGTCCG GGAAGAGGCC
AAGGGACATG AGAAGATCGG CACCACCGGC CGCGGCATCG GCCCCTGTTA CGAAGACAAG
GTGGGCAGAA ACGGGCTTCG GTTTGTGGAT ATGCTGGACC TGCCGGCCTT CAGGGAGAAG
ATGGCCCGGC AGGTCAAGGA AAAAAATCTT TACCTTGAAA GAATGTTCGG CGCCGCCCCC
CTGGACGTGG ACGGGGCCGT TGCCGAGTAC GTGGGATACG CCGAGACCCT GGCACCTTAT
ATCGCCGATG TGTCACGGAT TCTTGCCGAC GCCTCGGACG AGGGTCGACA GGTGCTCTTT
GAAGGGGCCC AGGGCACCTA CCTGGATATC GATCACGGCA CCTATCCCTA TGTCACCTCT
TCCAACACGG TGGCCGGTAA CGCCTGCTGC GGTTCCGGCA TCGGCCCCCG GGACCTTTCC
GGCGTGCTGG GCATTGTCAA GGCTTACACC ACCCGAGTGG GGGAAGGCCC TTTTCCCACC
GAGCTGTTTG ACGATGTCGG TGACTTCATG CAGCGTACCG GCAGCGAGTT CGGCGCCACC
ACCGGCCGAA AGCGCCGTTG CGGCTGGCTG GACGCCGTTA TGCTCAAAAG CGCGGCCCGG
CTGAACGGCC TGACCGGCCT GGCCATCACC AAGCTGGATG TGCTGACCGG TCTTGACACC
CTGGAAATAT GCACCGCCTA CCGATATCAG GGCAAAACCC TTTCCGATTT TCCCGCAGAT
GTAAAAACCC TTTCCCAGTG CGAACCGGTC TACGAAGCAG TGCAAGGGTG GCAGGAAGAT
ATCTCCGGCG TCCGGTCCGC AGCCGATCTG CCCGATGCGG CCCGGCGTTA TCTGGACCGT
ATCACGGAAC TGGTAGGCGT GCGGGTGGAT ATTGTTTCCG TGGGTGCGGG CCGTGACCAG
ACCGTGGTTA TCAATAACCC TTTTGCTTGA
|
|---|
| Protein sequence | MANIVVVGTQ WGDEGKGKIV DLLAAFADLV VRFQGGNNAG HTLVVNGESF ISHLVPSGIL
QGKMCLIGNG VVVDPAVLTE EMAALRSRGV AVIPEKFKVS ASAHIIMPYH KTIDLVREEA
KGHEKIGTTG RGIGPCYEDK VGRNGLRFVD MLDLPAFREK MARQVKEKNL YLERMFGAAP
LDVDGAVAEY VGYAETLAPY IADVSRILAD ASDEGRQVLF EGAQGTYLDI DHGTYPYVTS
SNTVAGNACC GSGIGPRDLS GVLGIVKAYT TRVGEGPFPT ELFDDVGDFM QRTGSEFGAT
TGRKRRCGWL DAVMLKSAAR LNGLTGLAIT KLDVLTGLDT LEICTAYRYQ GKTLSDFPAD
VKTLSQCEPV YEAVQGWQED ISGVRSAADL PDAARRYLDR ITELVGVRVD IVSVGAGRDQ
TVVINNPFA
|
|---|
| |