| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2017 |
|---|
| Symbol | |
|---|
| ID | 5694857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2447031 |
|---|
| End bp | 2447894 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641264615 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001529898 |
|---|
| Protein GI | 158522028 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000795883 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT GTATCGTAGC GCTGCTGGTC ATTGCCCTGG CGGTGGTTAT CTGTGCTTGC
GCGGCCAGGG AACCGGCGCC GGCGCCTGTC AGCACCAACC ATTTGAAGAT GGCGTTCGTC
TATGTTCCAC CGGGCAGCTT TGTCATGGGC AGCCCGGCAA AGGAACCCGG TCGCTTTAAG
GACGAGACCC TTCACAAGGT GGTGCTGACC CAGGGATTTT ACATCCAGAC CACGGAGGTG
ACCCAGGGCC AGTGGGAGGC GGTGATGCAG AGCAACCCTT CCGGCTTTAA AGCATGCGGC
TATGACTGCC CGGTGGAAAA CGTATCGTGG AACGATGTAC AGGAGTTTAT TCGCCGGCTG
AACAAAATAG AGGGGGCGGA TCGCTACCGG CTGCCGACGG AGGCGGAGTG GGAGTATGTC
GTCCGCCTGG GCACCGAAGA GAACATTATC AAGGGCGTGG TAAAAGGGGT GGTCAATATT
GTCGGTTCGA TTCTTTTCTC CTCCGGCGAG TGCCTCTCAA CGGAGGAGGC CAACTATAAC
GGGAATTTTC CCCTTGACAA CTGTCCCACC GGAGAGTTCC GTAACACCAC CCTGCCGGTG
GCCAGCTTTT CGCCCAACAA GCTGGGTATT CACGACCTGC ATGGAAACGT ATATGAGTGG
TGCCAGGATC TGTACGGCCC CTATCCGGAC TACAAGGTGA TTGATCCTCA GGGACCGGCC
ACCGTCAAAA CAGATGCTTA CAGGGTCTAT CGCGGAGGCA GCTGGTATTC CAGCGCCCGT
TACTGCCGGG CCGCCTACCG GGGAAAAGAG GCCCCTGATT TTAAATATTC CAATATCGGG
TTTCGGCTGG TAAAAAATCC TTGA
|
|---|
| Protein sequence | MKKCIVALLV IALAVVICAC AAREPAPAPV STNHLKMAFV YVPPGSFVMG SPAKEPGRFK
DETLHKVVLT QGFYIQTTEV TQGQWEAVMQ SNPSGFKACG YDCPVENVSW NDVQEFIRRL
NKIEGADRYR LPTEAEWEYV VRLGTEENII KGVVKGVVNI VGSILFSSGE CLSTEEANYN
GNFPLDNCPT GEFRNTTLPV ASFSPNKLGI HDLHGNVYEW CQDLYGPYPD YKVIDPQGPA
TVKTDAYRVY RGGSWYSSAR YCRAAYRGKE APDFKYSNIG FRLVKNP
|
|---|
| |