| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2016 |
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| Symbol | |
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| ID | 5694856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2444654 |
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| End bp | 2446975 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641264614 |
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| Product | SH3 type 3 domain-containing protein |
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| Protein accession | YP_001529897 |
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| Protein GI | 158522027 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1413] FOG: HEAT repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000554023 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTAA AACATTCCGC TTTTGTCAGG GGAGCGGCGG TTGTTTTCGC AACCGTGCTG
GCGGTATGGC TGCTGGCTGC CTGTGCCCCG TGGTATCGCG CGTATGACAT TGCGTCGGAC
GAGGATTTGA CAAAGATTTC CGCCATTCCA GAGCTTCAAA AAGCGTTGAA GGACAGCAAG
CCCGATGTTC GGGTCATGGC GGCACAGACC CTCGGAAGAA TCGGTCCCAA TGCCAGGAGC
GCGCTTCCCG ACCTGGTGGA TGTGCTGGAT GATGACAGGT ATGAGGTCCG GGCCGCAGGG
GCCGATGCCA TTGAGAAAAT TATCGGTCCT GATCCGGGAG AGGAAGACAG GGACCTGATG
GTGCGGGTCC ATATCAATCG CCTGGAGTCA AAAGACTGGA TAGCCCGCCT GAATGCCGCC
AATCATCTGG CGGAAATGGG ACCGGAAGGG GCCGATGCAG TGCCGGCCCT GGTCTCCGCC
CTGCTGGATA AGTCGGACTG GAACTCCCGT TACAATGAAG TGCGGCGGGC CGCCGCCCAT
GCCCTTGGCG AAATGCGGTT TGCGGCCAGG GCCGCCAATC CAGCCCTTAT TGAGGCTTCC
CGGTTCCATG ACTATGATGT CCGCCTGGAG GCGGTAAAGG CCCTGGGGAA GATCGGTCCC
AAGAACGATA CCTCGGTGAT TGAGGCATTG AAAGCTTCCC TGAAGGACCC CGATTTTGAC
GTGCGGCGTG AGGCGGCCAA CTCCCTGGGC GGGTTCGAAG TTTACGCGGA CAGCACCGTC
CCCAACCTGG TCAAGGCCCT TTCCGACCGG GATTTTGATG TTCGGCGTGA GGCGGCCCAT
TCTCTGGGCC GCATCGGCCC CAAGACCGAC GGGACAGTGG ATGCCCTTGT GATACTTCTG
GATGATGAAT ACGCCGATGT GCGCAAGGCG GCAACAGAGG CCCTGGGCAA TGTTTCCCCC
GACTACCGGG AAAAGGTGCT GCCCGGGATT CTTTCGCGGC TGGACGATAT AAACGAGGAG
GTTCGCCTGG CGGCGGTGAA TACCATTGCC AAGTTTCGCA TCGGCAACGA GCCGGTGTTC
CAGGCCCTGG AACGGTCAGC CCACGAGGAC CAGTCTTTTA AAGTAAAAAA ATCAGCCCTT
GAGACACTTT ACGTATTAAA GGGCCTGGAC GCCGGTACTG CAGTGGCCGG ACTTCGGACC
CGTCCGGCAG GTCCTGCTTC GGTGGCGGTT GAAGCCCCGG TTATCCTGCA AAAGACACCG
GCAAAAATCC GATCCACCGT GGATGTGCTT AACATCCGGT CCATGCCCAG CGTTAACAGC
CAGCGGATTG GCAAGCTTTA TCCCAACGAA ACCCCGCTCT TGCTTGAAAC CATGCCCGAC
TGGCTCAAGA TCAAAAAGCC GGACGGCACC ACCGGGTATG TTTTCAGGGA GTACGCCGAG
GTGGTGTCGA TGGCGGGAGC TGCGCCGGCT ACAATGGAGA CCGGCACTAT GAAGACCGCA
GCCGCGGCTG CGGCTGGTGC CGCTGTGACG GTGCCGGCAG CAGTAACGCC CCCGTCTGCG
ATGATGATCC GTTCCACCGC GGATGTCCTT AACATTCGGT CTGTTCCGGA CCTGAAGGGC
CGTCGCGTTG GAAAGCTTGT GTTAAATGAA GAGGCCAAAG TCCTGGAATC GGACGGCGAC
TGGCTGAAGA TCAGAAAACC GGACGGCACC ACCGGTTATG TGTTCAGGGA GTACACCGAG
GTGGTGGCAA AGGCCGGAGA TGCGCCGGCG GCAATGAAGG CCGCAGCCGC AGCCGCTGCC
GGTACCGCTA TGACGGCGCC GGCAACGATG ATCCGTTCCA CCGCGGATGT CCTTAACATT
CGGTCTGTTC CGGACCTGAA GGGCCGTCGT GTTGGAAAGC TTTTCTTAAA TGAAGAGGCC
GATGTCCTGG AATCGGACGG CGACTGGCTC AAGATCAGAA AACCGGACGG CACCACCGGT
TATGTGTTCA GGGAGTACAC CGAGGTGGTG TCCGGTACAA CGGCAGCCCC AGAACCTTCG
CCGGTAACAG TGGTAAAGCC TCAGGCTCCG GAAACCCTTC CGGCTGTAAC GCCGCCGGCG
CCGGTGGAAA CGGCGGCCGT GCCGTCGGTG CCAAAGGTCC GTTCAATCGT GGAGTCCCTG
GATATCCGGT CCGAGCCCTA TGGTGATGAG CAGGTGGGCC AGCTGGCGCA GGGAGAAGAA
GTGGAGGTGC TCGACACCCT TGCCGAGTGG GTTAAAATCA AAAAAGCAGA CGGCACCACT
GGGTATGTGT TCAAGGAATA CACCTCGCTT GTCAATAATT AG
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| Protein sequence | MPLKHSAFVR GAAVVFATVL AVWLLAACAP WYRAYDIASD EDLTKISAIP ELQKALKDSK
PDVRVMAAQT LGRIGPNARS ALPDLVDVLD DDRYEVRAAG ADAIEKIIGP DPGEEDRDLM
VRVHINRLES KDWIARLNAA NHLAEMGPEG ADAVPALVSA LLDKSDWNSR YNEVRRAAAH
ALGEMRFAAR AANPALIEAS RFHDYDVRLE AVKALGKIGP KNDTSVIEAL KASLKDPDFD
VRREAANSLG GFEVYADSTV PNLVKALSDR DFDVRREAAH SLGRIGPKTD GTVDALVILL
DDEYADVRKA ATEALGNVSP DYREKVLPGI LSRLDDINEE VRLAAVNTIA KFRIGNEPVF
QALERSAHED QSFKVKKSAL ETLYVLKGLD AGTAVAGLRT RPAGPASVAV EAPVILQKTP
AKIRSTVDVL NIRSMPSVNS QRIGKLYPNE TPLLLETMPD WLKIKKPDGT TGYVFREYAE
VVSMAGAAPA TMETGTMKTA AAAAAGAAVT VPAAVTPPSA MMIRSTADVL NIRSVPDLKG
RRVGKLVLNE EAKVLESDGD WLKIRKPDGT TGYVFREYTE VVAKAGDAPA AMKAAAAAAA
GTAMTAPATM IRSTADVLNI RSVPDLKGRR VGKLFLNEEA DVLESDGDWL KIRKPDGTTG
YVFREYTEVV SGTTAAPEPS PVTVVKPQAP ETLPAVTPPA PVETAAVPSV PKVRSIVESL
DIRSEPYGDE QVGQLAQGEE VEVLDTLAEW VKIKKADGTT GYVFKEYTSL VNN
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