Gene Dole_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2009 
Symbol 
ID5694849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2434242 
End bp2435141 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content57% 
IMG OID641264607 
Productalpha/beta hydrolase fold 
Protein accessionYP_001529890 
Protein GI158522020 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGC CTGTAGACAA AACTCCCTTT GCCCATCTCT ATCCCTTTGA TTCCCACTTT 
GTGGAGATCA ACGGATGGAA CTGTCACTAC CTGGACGAAG GCGCGGGAGA ACCCCTGCTC
ATGCTTCACG GCAACCCCAC CTGGTCCTTT TATTACCGGG AACTGGTCAA ACGCTTTTCC
CCGGATTTCC GGGTGGTGTG CCCGGACCAT ATCGGGTGCG GCCTGTCGGA CAAGCCGCCG
GCCGACCAAT ACGGATACCG GCTCAAAGAC CGGGTAAACG ACATTGAAAC CCTTGTCAAC
CACCTGAACC TTGACGGCAT CACCCTGATC GTGCACGACT GGGGCGGGTT TATCGGGTGC
GCCTTTGCCC TTCGAAACCT TGAAAAGATC AAGCGGGTGG TGATCACCAA CACGGCGGCG
TTTTTAAAAA TTTCGGGGAA ACCCATTCCG GCCCGGCTGC GCGTCCTGCG ACACATCGCG
CCGTTTGCCG TTCCCGCGGT GCTGGGCGCA AACCTCTTTG CCCGGGCCGC CCTTTACATG
GCGCCGAAAA AAAAGCTGCC CCCGGACGTA AAGGCCGGGC TGATCGCCCC TTACAACAGC
TGGGCCAACC GGATCGCCAC GCTGAAATTT GTTCAGGACA TCGCCCTGTC CGAAAAAGAC
CCCAGCTATG AAATGGGCCG GTTTCTGGAC GACAACCTCT ACAAGCTCTC CGGCTTTCCC
ATGCTGATCT GCTGGGGCCT GCACGATTTT GTGTTTGACA CCGACTATTT TGCCGAGTGG
CAGCGCCGCT TTCCCCATGC CGAAAGCCAT GGGTTTGAAA CAGCGGGCCA CTACCTGCTG
GAAGATGAAC CTGAGCAAGT AGGCGACCGG ATCAAAGCCT TTTTGAAAAA ACATCCGTGA
 
Protein sequence
MATPVDKTPF AHLYPFDSHF VEINGWNCHY LDEGAGEPLL MLHGNPTWSF YYRELVKRFS 
PDFRVVCPDH IGCGLSDKPP ADQYGYRLKD RVNDIETLVN HLNLDGITLI VHDWGGFIGC
AFALRNLEKI KRVVITNTAA FLKISGKPIP ARLRVLRHIA PFAVPAVLGA NLFARAALYM
APKKKLPPDV KAGLIAPYNS WANRIATLKF VQDIALSEKD PSYEMGRFLD DNLYKLSGFP
MLICWGLHDF VFDTDYFAEW QRRFPHAESH GFETAGHYLL EDEPEQVGDR IKAFLKKHP