Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1987 |
Symbol | |
ID | 5694827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2403171 |
End bp | 2404019 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641264585 |
Product | hypothetical protein |
Protein accession | YP_001529868 |
Protein GI | 158521998 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000119208 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACATT CACTCATGAC CACGGTGCTG CTGATGGTGC TGGCGGCCCT GTTCGCGACA ACGATTTTTC TTGCCGAGCC CATGGAAAAG AGCGGCGATA TTTACCTTCA GAACACCCTG AAAAAGGCAT CCATCTCCTT TGCCGGGGCA CGGGCCATCA ACGCCCTTGT TTCCGTGCTT CAAAAAATAG AGGCCGGAGG CTCTCTCAAA CTGCTGGGCA CCGGCGGGTC TGCCACCATT GCCCCGTTTG AATGGCTGGA CCCCATCAAT GACCTGGCCG AGTGGTTCTC CCTGATCATG CTGGCCAGCT GCGTGTCCGT GGGCATTCAG ATGTTTATCA ACCAGGCCAT GCCGTGGCTC GGGGTGATGG TGCTGTTGCC CCTGGCCGGG GCCCTGCTGA TCCTGGCCCT GGTCATAAGA ATTTCCGGAT ATTCGGCAGG CCGTCTCCTG TTCCGGTCCG GGTGCAAGAC CCTGGTGATC ACCATCCTGC TCACCGGCAT GATTCCGGCC ATGGCCGCCG TCAACCACGC CGCCTATAAA CTGTTTCTCA ATGACACCTA TGAAACCGCC GCCGCGACCC TTCAGGCCCA GTCCGACGGC ATTGCCGCCG CTGAAAAAAA GAGCGGGGTC ATGGAGGCGG TCGCCGGGCT GGCCGAACAG GCCGAGTCCC TGAAAGAGAA GGCCGCCCGG CTGGTGGACC ACATACTGGA CCTGATCGTG GTGTTCCTGG TCCAGACGAT CCTGCTGCCC CTTGTGATCG TCTGGCTCTT TGTCAAGCTG ATCACCCGCC TGCTCCTGGG CCGGGGAGAA TGGCCCTTTG AAACGGCCTT TGACCCGAAT GTTTCATGA
|
Protein sequence | MKHSLMTTVL LMVLAALFAT TIFLAEPMEK SGDIYLQNTL KKASISFAGA RAINALVSVL QKIEAGGSLK LLGTGGSATI APFEWLDPIN DLAEWFSLIM LASCVSVGIQ MFINQAMPWL GVMVLLPLAG ALLILALVIR ISGYSAGRLL FRSGCKTLVI TILLTGMIPA MAAVNHAAYK LFLNDTYETA AATLQAQSDG IAAAEKKSGV MEAVAGLAEQ AESLKEKAAR LVDHILDLIV VFLVQTILLP LVIVWLFVKL ITRLLLGRGE WPFETAFDPN VS
|
| |