| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1974 |
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| Symbol | |
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| ID | 5694814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2387523 |
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| End bp | 2388560 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641264572 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001529855 |
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| Protein GI | 158521985 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGCA AGGTAGCCAT ATCCCGGGAT GACCGCTTTC TGCTTCACAA AACCGGTCAC
GCCCATCCGG AGAGCCCCTC CCGGCTGGCT TCGATCTATC GCATGGTGGA CCGGCATTTT
GCCGGCACAG TGACAACAAT GACGCCGGAG CCGGCCACCC TGGACCAGCT GGAGCTGGTC
CACACCCCCG GCCATGTGAA AAAAATATTA AAGACCGCTG AGCACAAAAT CACCAGCATG
GCGCCGGACA CGCCGGTCAG CGGCCACTCC TACCTGGCGG CCTGGCTGGC GGCCGGGGCC
TGCATGCAGG GGGTGGACCT TCTTTTGTCC GGCGCCTGCC GCGCCTTTTT CTCCCTGGTG
CGGCCCCCGG GCCACCACGC CCTGCCGGAC CGGGCCACCG GTTTCTGCCT GCTCAACAAC
CTGGCCATCG CGGCCCGGTA TGCCCGAATG CGTTACAACC TGGAACGGAT TCTGATCGTC
GACTGGGACG TGCATCACGG CAACGGCATT CACGACATCT TTTACCGGGA GCCAGGCGTT
TTCTACGTCT CTTCTCATGA CCTGATGCTG TTTCCCTATT CCGGGGAGGC AGGCGATACC
GGCGAGGCCG GGGGCAGGGG GTTTACCCTG AACATGCCCC TGTCCCGCTC CTTTGGCGAC
GGTGACATGG CATACATCTA CCGCACTGTG CTGACGCCGG TTTTCCGGTG GTACACGCCC
TCAATGGTAA TGATCGCCGC CGGGTTCGAC GCCCATGCCG ACGATCCCCT GGGCCGTTCG
GCCTGGAGCG AAAACGCCTA TTTCCTGCTT GCGCGCCTGG TGTGCGAACT GGCCGATGCC
GATCATGTTC CCCTTCTGCT TTCCCTGGAA GGCGGATATG ACCCCGGCGC CAATGCCGCG
TCAGCCAAAG CCGTGCTGGA GGCCCTGGTC TCATACGCTC CGGCCGGACC GGTGCCGGCG
CCCCTGGACC CGAATGCGGC CGACGAACTG CTGGAGACTG TTTTTACAAC CCACAAACCT
TATGGAATCG TGTCATGA
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| Protein sequence | MSRKVAISRD DRFLLHKTGH AHPESPSRLA SIYRMVDRHF AGTVTTMTPE PATLDQLELV
HTPGHVKKIL KTAEHKITSM APDTPVSGHS YLAAWLAAGA CMQGVDLLLS GACRAFFSLV
RPPGHHALPD RATGFCLLNN LAIAARYARM RYNLERILIV DWDVHHGNGI HDIFYREPGV
FYVSSHDLML FPYSGEAGDT GEAGGRGFTL NMPLSRSFGD GDMAYIYRTV LTPVFRWYTP
SMVMIAAGFD AHADDPLGRS AWSENAYFLL ARLVCELADA DHVPLLLSLE GGYDPGANAA
SAKAVLEALV SYAPAGPVPA PLDPNAADEL LETVFTTHKP YGIVS
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