| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1968 |
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| Symbol | |
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| ID | 5694808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2379419 |
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| End bp | 2380372 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641264566 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001529849 |
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| Protein GI | 158521979 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CCTTGATTTG CGGGGTAAGC GGCCAGGACG GGGCCTATCT GGCCAAACTT
CTGGTAGAAA AAGGATACCG GGTATGCGGC ACATCCCGAG ATGCCCAGAA CGCCACCTTT
TCCAACCTGA AAAAACTGGA CATCCTGAAT TCCATCAAAA CCTATTCCAT GGCGCTGAAT
GATTTCAGAA GCGTGCTGCA CGTCCTCAAC GATGTGGAGC CGGATGAGGT ATATAATCTT
TCTGGACAGA GTTCAGTGGG GCTTTCCTTT GAGCAGCCGG TCGAAAGCAT GGAAAGCATC
AGCCTGGGGA CCCTTAACAT GCTGGAAGCT ATACGGTTTC TTTCCAAAAA AATCCGATTC
TACAATGCCG GATCCAGCGA ATGTTTCGGA GAGACCACGG TGGACAAACC GGCGGACGAG
GCCACGCCGT TCCACCCGCA GAGCCCTTAC GCCGTGGCAA AAAGCGCGGC CCACTGGCAG
GTAGCCACCT ACCGGGAGGC GTATGGATTG TTCGCCTGCA CCGGCATCCT GTTCAACCAC
GAGTCATGTC TGAGACCGGA ACGGTTCGTC ACCCGAAAAA TCATCGAATC CGCCCGCCGT
ATCTCCATGG GGTCAAAAGA AACGCTGGTG CTGGGCAATA TTAAAGTGGT CCGGGACTGG
GGATGGGCAC CTGAATATGT TGACGCCATG TGGCGTATTC TGCAGATGGA CTCGCCTGCT
GATTTTGTCA TTGCTACCGG GCACAGCACC AGCCTGGAGC ACTTTGTAGA ACTGGTGTTT
GCTGCATTTA ACCTTGACTG GGAAAAACAT GTAGAGACGA GGCCTGAACT GTTGCGTCCG
TTGGATTTGG TGCAAAGCCA TGCAAACCCG GCCTGTGCAA TGAAGAAACT CGGCTGGCAG
GCAAAAAACA AGGTGGAAGA GGTGGTGCGG CTTATGGTTA ACGAAACATT ATAA
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| Protein sequence | MKKALICGVS GQDGAYLAKL LVEKGYRVCG TSRDAQNATF SNLKKLDILN SIKTYSMALN
DFRSVLHVLN DVEPDEVYNL SGQSSVGLSF EQPVESMESI SLGTLNMLEA IRFLSKKIRF
YNAGSSECFG ETTVDKPADE ATPFHPQSPY AVAKSAAHWQ VATYREAYGL FACTGILFNH
ESCLRPERFV TRKIIESARR ISMGSKETLV LGNIKVVRDW GWAPEYVDAM WRILQMDSPA
DFVIATGHST SLEHFVELVF AAFNLDWEKH VETRPELLRP LDLVQSHANP ACAMKKLGWQ
AKNKVEEVVR LMVNETL
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