Gene Dole_1961 details

Gene Information

• Locus tag: Dole_1961
• ID: 5694801
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 2372171
• End bp: 2372746
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641264559
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_001529842
• Protein GI: 158521972
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGCAA TAACGACGCC GCGCTTCGAC ATCACCCCCC TGCCCCTCTC CGGTCTTTGT 
CTTGTCCAGC GAAAACGAAT GGGCGATGCC AGGGGGTTTC TGGAGCGGCT GTTCTGTGCC 
GAAGAGCTGA CCCGGGCCGG ATGGGACGGG CCGATTGCGC AGATCAACCA CACTTATACC 
GCCGCTGCCG GAACTTTGCG GGGCATGCAT TTTCAGCGCC CACCCCACGC TGAGAAAAAG 
CTGGTGATGT GTCTTAAAGG CCGGGTGTTT GATGTTGCCG TTGATACCCG CAAAGGGTCC 
CCCACATTTC TGAAGTGGCA CGGAGAAATT CTAGCCCCTG AAGCGGCCAA CGCCCTTTTA 
ATTCCTGAAG GCTTTGCCCA CGGTTTTCAA ACCCTGACCG ACGATGTTGA GATGCTCTAT 
TGTCACTCCG CGGTTTACGC GCCGGATCAC GAGGGCGGGC TTCACCCTCA GGACCCGGCC 
ATCAATATTC AGTGGCCGGA TGAACTTGTC ACACTTTCGG ACAGAGACCA GGGTCATCCA 
TTCTTGGGCG ATTCATTTGA GGGGGTTGCC TTATGA 

 

Protein sequence

MGAITTPRFD ITPLPLSGLC LVQRKRMGDA RGFLERLFCA EELTRAGWDG PIAQINHTYT 
AAAGTLRGMH FQRPPHAEKK LVMCLKGRVF DVAVDTRKGS PTFLKWHGEI LAPEAANALL 
IPEGFAHGFQ TLTDDVEMLY CHSAVYAPDH EGGLHPQDPA INIQWPDELV TLSDRDQGHP 
FLGDSFEGVA L