| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1953 |
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| Symbol | |
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| ID | 5694793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2363496 |
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| End bp | 2366375 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264551 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001529834 |
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| Protein GI | 158521964 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.212606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAA ACGGAACCAT AAGTGAATAT ATTCAGTCTC TTGTAGCTTC ACCGCGAATG
GCCGGCGAGG TGGTTTACCA CACCGCGCTG GATCCGGTGC CGGCCCGGAT GGTTAGAAAG
CCGGATTGGG GAGTGCCTGA GGCGGCCTGT CTTTCCGCCA TACTGGCCAC GGAAGGGCTG
TATGCCCACC AGGCCGATGC CATTGGCCGG GTGTTGTCAG GAGAGAACGT GGTGGCGGCC
ACGCCCACGG CCAGCGGCAA GACCCTGATC TATAATATTC CCGTGCTCCA GCGGCTGAAG
GAAAATCCGT CGGCCCGGGC CCTTTATCTC TATCCGCTCA AGGCCCTGGC CAGGGACCAG
TTGCGGGCAC TGCAGGAAAC CGCCGGCGCC GCGGGCATGG CGGAGGCCGT GTCCGCGGCC
ATCTACGACG GTGACACCAC GGCCTGGCAC CGGAAAAAAA TCAGAGACAA CCCGCCCTCG
GTGCTGATGA CCAATCCGGA CATGCTGCAC CTGGGGCTGC TGCCCTATCA TGAGACCTGG
CATACTTTTT TTGCCAATCT TGCCTTTGTG GTCATTGACG AGATTCACAC CTACCGGGGC
GTGATGGGGT CTCACATGGC CCACGTGTTC CGCCGTCTCT ATCGTGTCTG CACCCACCAC
GGCGCCGCCC CCCTGTTCGT GGCCGGGTCG GCCACCATTG CCAACCCGGA AGAGCTGGCC
GGCCAGCTCA CCGGCCGGCC GACAACGGCG GTCACAAAAA GCGGGGCCCC CAGGGGAAAA
CGTCACGTGG TGTTCATGAA TCCGGTAACC GGTCCGGTGG CCACCACCAT TCAACTGCTT
CGGGCCGCCC TGTACCGGGG GCTTCGCACC ATTGTCTACA CCCAGTCCCG GAAGCTGGCC
GAGCTGATAT CCATCTGGGC GGAAAAGAAA AGCCCCCATG CCCATCAAAT CAGCTCCTAC
CGGGCCGGGT TTCTGCCGGA CGAGCGCCGG GAGATCGAGC GAAAGCTTTC CGCCGGCGAA
CTGCTGGCCG TGATATCCAC CAGCGCCCTG GAACTGGGCA TCGATATCGG AGACCTGGAC
CTCTGCCTGC TGGTGGGGTA TCCGGGGTCA GTCATGGCTA CATGGCAACG CGGGGGCAGG
GTGGGGCGGG CCGGCCAGGA GTCGGCCATG ATCCTGATTG CCGGGGAAGA CGCCCTGGAC
CAGTATTTTA TGCGCAATCC CGGGGCCTTT CTGAGCCTGC CCCCGGAGGC GGCGGTGATT
AACCCGGACA ACCCGGCCAT TGTTGAAAAG CACCTGGTAT GCGCCGCCGC CGAACACCGG
TTGCGCGTGG ATGAGCCTTT TCTGCAGGGG GCGGCCATGC AGCGGGCCGT CGCGACGCTG
GAGAAAAAAG GGGAGCTGTT GCGCAGCGCC GACGGGATGT ACCTGTTTGC GTCGCGAAAG
CGGCCTCACC GGGAGGTCGA CCTGCGGGGC GCGGGCCGTA GCTTCAAGGT GATCTGCGAC
CAGACCGGGG ACCACATCGG CGACATCGAC GGCATGCGGG TGTTCAGGGA CGCCCATCCC
GGCGCGGTTT ATCTGCACAT GGGCCAGACC CACGTGGTAA AAAATCTGGA TGTCGGTGCC
ATGCGCGTGA TTGTGTCCCG GCAGCCGGTC AATTACTACA CCAAGCCCCG GTCCACCAAG
GACACCGAGA TTCTGGAAAC CTTTCAGACA AAACAGGTGG CCGGCATCAC GGTGTGCACG
GGCCGCCTTC GCGTGACAGA AACCATCACC GGGTATGAGA AATGGCGGCT GTACGGAAAG
CGGCGCGTGT CCGTGGAACC GCTGGACCTG CCGCCCCTTG TGTTTGAAAC GCAAGGGGTG
TGGCTGGCCA TTCCCGACCG TATTCAGGAC GCGGCAGAGA GTGAATACCG GCACTTCATG
GGCGGGATTC ACGCCATTGA GCATGCCGTC ATCGGCGTGC TGCCCATCTT TGTGATGTGC
GACAGAAACG ACCTGGGCGG CATCTCCATG ACCTTTCATC CCCAGGTCGG CACCCCGGTC
ATCTTTATCT ACGATGCCGT GGCCGGGGGT ATCGGCCTTA GCCGCCAGGC CTATGAAAAG
GTGGCAGAGA TTCTCGGCTT TACCCGCAAC CTGATTTCCC AGTGTCCCTG CAAGACCGGG
TGCCCCGCCT GTGTTCATTC GCCCAAGTGC GGCTCCGGCA ACCGGCCCAT TGACAAAGCC
TGCGCCCTTT ACCTGCTGGA ACAGATGGCC CGGCCACCGG CAGCCGGTGC CCGGAGCCGG
ACACGACGGG CCGCGGCCCC GGTTTTGCAA CCGGCCCGCA CCATACCGCC GCCGGTTCGC
ACCGGAGATG TTCGGTTCGG CGTGTTCGAT ATCGAGACCC AGCGTTCTGC CGCAGAGGTG
GGCGGCTGGC ACCGGGCCGA CCGCATGGGC ATCAGCTGCG TGGTGCTGTA CGATTCGGCC
ACGGATACCT ATGACGCATT CCTGGAAAAC CAGGTGGCGG CGTTTATTCG CCGGCTTTCT
GATTTTGATC TGGTGGTGGG GTTTAACAAC AAGCGGTTTG ACAACCAGGT CCTGGCGGGC
TACAGCGACG CCGATCTTTC CCGGCTACCC ACCCTGGATA TTTTAGAGGA GGTGCACAAG
ACCCTGGGCT ACCGGCTTTC CCTCGATTCA TTGGCAGAGA TCACCCTGGG CGCGAAAAAA
AGCGCCAACG GGCTGCAGGC ACTGATCTGG TGGCAGCAGG GAGAGATCGA CAAGATCGTT
GAGTATTGCA AAAAGGATGT TCAGATCACA AAAGACCTCT ACCTTTACGG CAAAATCAAC
GGCTACCTGC TGTTTCGCAA CAAGGCCAAA CAGCAGGTTC GCCTGCCTGT AGACTGGTAA
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| Protein sequence | MDRNGTISEY IQSLVASPRM AGEVVYHTAL DPVPARMVRK PDWGVPEAAC LSAILATEGL
YAHQADAIGR VLSGENVVAA TPTASGKTLI YNIPVLQRLK ENPSARALYL YPLKALARDQ
LRALQETAGA AGMAEAVSAA IYDGDTTAWH RKKIRDNPPS VLMTNPDMLH LGLLPYHETW
HTFFANLAFV VIDEIHTYRG VMGSHMAHVF RRLYRVCTHH GAAPLFVAGS ATIANPEELA
GQLTGRPTTA VTKSGAPRGK RHVVFMNPVT GPVATTIQLL RAALYRGLRT IVYTQSRKLA
ELISIWAEKK SPHAHQISSY RAGFLPDERR EIERKLSAGE LLAVISTSAL ELGIDIGDLD
LCLLVGYPGS VMATWQRGGR VGRAGQESAM ILIAGEDALD QYFMRNPGAF LSLPPEAAVI
NPDNPAIVEK HLVCAAAEHR LRVDEPFLQG AAMQRAVATL EKKGELLRSA DGMYLFASRK
RPHREVDLRG AGRSFKVICD QTGDHIGDID GMRVFRDAHP GAVYLHMGQT HVVKNLDVGA
MRVIVSRQPV NYYTKPRSTK DTEILETFQT KQVAGITVCT GRLRVTETIT GYEKWRLYGK
RRVSVEPLDL PPLVFETQGV WLAIPDRIQD AAESEYRHFM GGIHAIEHAV IGVLPIFVMC
DRNDLGGISM TFHPQVGTPV IFIYDAVAGG IGLSRQAYEK VAEILGFTRN LISQCPCKTG
CPACVHSPKC GSGNRPIDKA CALYLLEQMA RPPAAGARSR TRRAAAPVLQ PARTIPPPVR
TGDVRFGVFD IETQRSAAEV GGWHRADRMG ISCVVLYDSA TDTYDAFLEN QVAAFIRRLS
DFDLVVGFNN KRFDNQVLAG YSDADLSRLP TLDILEEVHK TLGYRLSLDS LAEITLGAKK
SANGLQALIW WQQGEIDKIV EYCKKDVQIT KDLYLYGKIN GYLLFRNKAK QQVRLPVDW
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