| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1952 |
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| Symbol | |
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| ID | 5694792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2362160 |
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| End bp | 2362972 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641264550 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001529833 |
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| Protein GI | 158521963 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes |
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| TIGRFAM ID | [TIGR01949] predicted phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.647076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCT TAGGCAAGCG GATTCGGATT GAACGGCTGA TGAACCGGAA CACCGGCAAA
ACCGTGATCG TTCCCATGGA CCATGGCGTG TCTGTCGGCC CCATCGACGG GCTTACCGAC
ATGCGCACGG CGGTGCAGCG AGTGGCCGAG GGCGGGGCCA ACGCCATCGT GGAACACAAG
GGACTGGTGG GAAAGGGCCA CCGGGGCAGC GGCAAGGATA TCGGGCTGAT TCTTCATCTG
TCCGCCTCCA CCAGCCTGTC GCCATATCCT CACGCCAAGA CACTGGTGTG CAGCGTGGAG
GAGGCGGTGA AGCTGGGCGC GGACGGGGTT TCCATTCACG TCAACCTGGG CAACGGGGAT
GAAAAACAGA TGCTTCACGA CTTCGGCAGG GTCAGTGCTG ATGCCCGGGA GTGGGGCATG
CCGCTGCTGG CCATGATTTA TCCCAGGGGC GAGAAGATCA AGGACGAGTT TCATGTGTCG
GTGATCAAGC ATGCGGCCCG GGTGGGAGAT GAACTGGGCG CGGACATCGT CAAGGTTTCC
TACACCGGCA GCCCCAAGAC CTTTCAAGAG GTGGTGGCGG GATGCTCGGT TCCGGTGGTG
ATTGCCGGCG GGCCCAAAAT GGGTTCGGAC CGGGAAATTC TGGAAATGGT CAGGGGCTCT
GTGGATGCCG GCGGTGCCGG TGTTTCCATC GGCCGAAACG TGTTTCAGCA TGCCAACCCC
ACCCGCATGG TGGAGGCGAT TTCCGCCATT GTTCATGACG GCGCCGGCGT GGCCAAGGCT
TTGAAGATGC TCGAGGTAAA AAAGTCCAAA TAG
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| Protein sequence | MTILGKRIRI ERLMNRNTGK TVIVPMDHGV SVGPIDGLTD MRTAVQRVAE GGANAIVEHK
GLVGKGHRGS GKDIGLILHL SASTSLSPYP HAKTLVCSVE EAVKLGADGV SIHVNLGNGD
EKQMLHDFGR VSADAREWGM PLLAMIYPRG EKIKDEFHVS VIKHAARVGD ELGADIVKVS
YTGSPKTFQE VVAGCSVPVV IAGGPKMGSD REILEMVRGS VDAGGAGVSI GRNVFQHANP
TRMVEAISAI VHDGAGVAKA LKMLEVKKSK
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