| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1947 |
|---|
| Symbol | |
|---|
| ID | 5694787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2356890 |
|---|
| End bp | 2357954 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641264545 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_001529828 |
|---|
| Protein GI | 158521958 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGTA ATACTTTTGG AGAGCTGTTT CGCGTTACCA CATGGGGAGA GTCCCACGGG
CCGGGCATCG GTGTGGTCAT CGACGGGTGC CCGCCCGGCC TTGCCCTGGA CGAAGCCGGG
GTGCAGAAAA TGCTGGACCG CCGCAAGCCC GGCGGCGGGT CCATTGCCAG CACCGCCAGA
AAAGAGGCGG ACCGGGCCGT TATCCTGTCC GGCGTGTTTG AAGGCAAAAC CACGGGCACC
CCGATCCTGA TCATGGCCCA TAACAGGGAT GCCCGGTCAT CCGCCTACAC CGACATCGCC
GGCCTGTTCC GGCCCGGGCA TGGTGACATC ACCTACACGG CCAAGTACGG CATTCGGGAC
TGGCGGGGCG GGGGCCGGGC CTCGGCCCGG GAGACCTTTG GCCGGGTGGC GGCCGGGGCC
GTGGCCGCTG AACTGCTTCG GCTTTCCGGT ATTTCAGTTG CGGCCTACAC CCTGGAACTG
GGCGGCATCC GCGCAACAAC CATTGATGTC GGGCAGGTTG ATCAGAACAT GTTCGGCTGC
CCGGACAGCA CTGTTATGGC GGCCATGACT GACCGTGTGA CCCAGGTAAA GCGGCGGGGT
GACTCTGTCG GCGGCATCGT CGAGGTCCGT GCCGATGGCG TGCCCGCCGG CCTGGGAGAG
CCGGTGTTTG ACAAACTGGA TGCCGACATT GCCAAAGCCC TGATGAGTAT CGGCGCGGTA
AAGGGAGTTG AGATCGGCGC CGGGTTTGAA GCATCGGGTA TGACCGGCTC CCGGAGCAAC
GATGAAATCA CGCCCCAGGG GTTTGCCACC AATAATGCCG GCGGCATTCT GGCCGGCATT
TCCAACGGGG ACCGGATCGT GGCCAGGGCC GCGGTCAAGC CGATTCCCTC CATCGGCATT
ACCCAGCAAA CCGTGGATAC AAACGGCAAA CCGGCCTCCA TTTCCATCAA GGGCCGGCAC
GATATTTCCG CCATTCCCCG GATCAACGTG GTGTGTGAGG CCATGGTGTG CCTGGTGCTG
GCCGATCATC TTCTTAGACA GAAAGCGATT TCATGGACCC GGTAA
|
|---|
| Protein sequence | MAGNTFGELF RVTTWGESHG PGIGVVIDGC PPGLALDEAG VQKMLDRRKP GGGSIASTAR
KEADRAVILS GVFEGKTTGT PILIMAHNRD ARSSAYTDIA GLFRPGHGDI TYTAKYGIRD
WRGGGRASAR ETFGRVAAGA VAAELLRLSG ISVAAYTLEL GGIRATTIDV GQVDQNMFGC
PDSTVMAAMT DRVTQVKRRG DSVGGIVEVR ADGVPAGLGE PVFDKLDADI AKALMSIGAV
KGVEIGAGFE ASGMTGSRSN DEITPQGFAT NNAGGILAGI SNGDRIVARA AVKPIPSIGI
TQQTVDTNGK PASISIKGRH DISAIPRINV VCEAMVCLVL ADHLLRQKAI SWTR
|
|---|
| |