| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1946 |
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| Symbol | |
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| ID | 5694786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2356063 |
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| End bp | 2356902 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641264544 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_001529827 |
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| Protein GI | 158521957 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.772286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCGG TAACAATCGG CATCGCCGGC GGCACAGGCG GCATGGGCCA GTGGTTTCAA
AATTATTTTA CACAGGCCGG TCATGCGGTG CGGATTGCCG GAAGAAAGAC GGAGGTCACC
TACGAGGATC TGGTCCGCGA CTGTGACGTT GTAATTCTAA GCATGCCCCA GAAGGCGGCC
ATGGCGGTGG CCGGCCGGAT CGGCCCGGCC ATGCGCGAAG ACCAGTTGCT CATGGACTTT
TGTTCCCAGA AGGCGGGTAT TGTGGCGGCC ATGGCAGGGG CCACCCGGGC CGACGTGATC
GGGACCCATC CCATGTTCGG CCCCAGCACC GCGTCTCTTG CCGGTCAGAA TATTATCCTG
TGTCCGGCCC GGAACAGCCA CAACTGGCTC TCCTGGGTGG AAAGGGTATT TGCCGACGGC
GGCGCCGTGG TCACCCGCAT GGAACCGGAA GAACACGACC GCAAGATGGC CCTGGCCCAG
AGCCTGAAAC ACTTTCTCAC TGTTTCTCTG GCTCGGATGC TTCAGACACT TGATATCCGT
CCTGACGATG CGTTCCTGTA CGCCACGCCG ATTTTCCGGC TCAACATCAA CCTGATCGGC
CGCCTTTTGG CCCAGGACCT GTCCCTGTAT GCCGATCTTG TTTCAGGCAA CCCCCAGGCG
CCTGTGGTGG TGGACCGGTT TCTTGCTGCC ATGGAGGAGA GCCGCCGAGC CTTTTTTTCA
GGGGACGAGC AAAAGGCTGC CGACTACCTG ACGGAGATTC GAAAGTTCTT TGGTGACGAC
TTCTGCAAAG AGGCCCTGGA AGAGACCAGC CGGGTCATTG ATGCCATGTA CCGCTCGTGA
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| Protein sequence | MDPVTIGIAG GTGGMGQWFQ NYFTQAGHAV RIAGRKTEVT YEDLVRDCDV VILSMPQKAA
MAVAGRIGPA MREDQLLMDF CSQKAGIVAA MAGATRADVI GTHPMFGPST ASLAGQNIIL
CPARNSHNWL SWVERVFADG GAVVTRMEPE EHDRKMALAQ SLKHFLTVSL ARMLQTLDIR
PDDAFLYATP IFRLNINLIG RLLAQDLSLY ADLVSGNPQA PVVVDRFLAA MEESRRAFFS
GDEQKAADYL TEIRKFFGDD FCKEALEETS RVIDAMYRS
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