| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1940 |
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| Symbol | |
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| ID | 5694780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2343735 |
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| End bp | 2345303 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641264538 |
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| Product | SH3 type 3 domain-containing protein |
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| Protein accession | YP_001529821 |
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| Protein GI | 158521951 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1413] FOG: HEAT repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTGGA AAACTCACAC CATTGTCAGA GGCACAATCG TTATATTCGG TATTGTCCTG
GCGGCATGGA TGCTGGCTGC GTGTGCCCCG TGGTACCGGT CTTATGACAT CACGTCGGGC
GAGGATTTGA CAAAAATTTC CGCCGTTCCC GAGTTACGAA AAGCTCTGAA GGACAGTAAG
CCGGACGTTC GAATGGCGGC GGCCACGGCC CTTGGACGGA TCGGGCCCGA CGCAAGGGAT
GCGCTCTCCG ATCTTGTGGA TGTACTGGGC GACAACAGGC ACGAGGTGCG CGAGGCATCG
GCAAATGCGA TTTCGTCTAT TATCGGAACC GCACCGGTAT CGGAAGCGGA TAAGAACCTG
ATGGTGCAGG TGCAGGCCAA CCGCCTTGCG TCCGAGGACT GGGCGGCTCG TGTGGACGCC
GCCGACCAGT TGGCCCAAAT GGGCCCGGCT GGCGCGGATG CGGTTCCCGT GTTGATTTCC
ACCCTGTCGG ACGAAACAGA ATGGAGTTAT TACTGGACCC GGCAGTACGA TAAAGTAAGA
CGCGCCGCCG CAAACGCCCT TGGGGAGATG CGTTCCGCGG CAACGGCCGC CAGTCCCGCG
CTGATCAAGG CCTCAAAATA TCAAGATCCC GGGGTTCGCC TGGAGGCGGT CAGGGCCCTG
GGTAAAATCG GCACTCCATC CGACAGCACT GTAGTTAAGG CATTAACGGC CGCGTTAAAG
GACGATGACG CGGGTGTGCG TCGCGAGGCG GCCGACGCAC TGGGGGCCTT TGAGGTGTAT
GCAAACAATA CGGTTCCCAA CCTGGTAGAC GCTCTTTCCG ATCAGGATGT TGATGCGCGA
AGAAAGGCGG CTCAGGTACT GGGCCGCTTC GGTCCCAAGA CAGACGCGGC GGCGGAAGCC
CTTGTGGCCG CGCTGAAGGA TACCGACAAA GCGGTCAGGC AGACGGCGGC CCGCGCAATT
GCCGAATTTG GCATCGACAA CAAGACGGCG GCAGCCACCC CCCTGAGACC GCCGGTTGCC
GCTATGGCCC CTGAAGAGAC TGCAGCAGTG GAGACTACGG CACAACCGGA GACAAAAATC
CGTTCCACTG TGGATCTGCT TAACATTCGG GCCATGCCCA GTGTAAACAG CCGACGTGTA
GGTAAACTGC TGCAAAACGA AATTGCAACA GTGGTTGAGA CCCTGGTGGA TTGGGTCAAA
ATCGAGAAAC CCGACGGCAC CACCGGCTAT GTGTTTAAAG AGTACACAGC GATGGTGCAT
GAGACAGGGG ATGCCTCCAG GGTGCTACAA CCAGAGTCAC AGAAGGCGCA AGCCACTGTC
AACATGCCGA TGGTACCGGT TGTCACCGCA CCGGTTGCCG TTGCTTCGGC TTCGACAGTT
CCCAAAATAC GGCCAATCGT GGATGCCCTT GAGATGCGAT CAGAGCCTTT TGGGAGTGAA
CAGGTCGGCC AACTGCTGCG TAATGAAGCG GCGGAGGTTG TCGAGAGCCG GGCCGGATGG
ATCAAAATAA AAAAAGCCGA CGGCACCACC GGCTATGTGT TTAAAGAATA TACAGAGAGT
GCCCCCTGA
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| Protein sequence | MPWKTHTIVR GTIVIFGIVL AAWMLAACAP WYRSYDITSG EDLTKISAVP ELRKALKDSK
PDVRMAAATA LGRIGPDARD ALSDLVDVLG DNRHEVREAS ANAISSIIGT APVSEADKNL
MVQVQANRLA SEDWAARVDA ADQLAQMGPA GADAVPVLIS TLSDETEWSY YWTRQYDKVR
RAAANALGEM RSAATAASPA LIKASKYQDP GVRLEAVRAL GKIGTPSDST VVKALTAALK
DDDAGVRREA ADALGAFEVY ANNTVPNLVD ALSDQDVDAR RKAAQVLGRF GPKTDAAAEA
LVAALKDTDK AVRQTAARAI AEFGIDNKTA AATPLRPPVA AMAPEETAAV ETTAQPETKI
RSTVDLLNIR AMPSVNSRRV GKLLQNEIAT VVETLVDWVK IEKPDGTTGY VFKEYTAMVH
ETGDASRVLQ PESQKAQATV NMPMVPVVTA PVAVASASTV PKIRPIVDAL EMRSEPFGSE
QVGQLLRNEA AEVVESRAGW IKIKKADGTT GYVFKEYTES AP
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