| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1931 |
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| Symbol | |
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| ID | 5694771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2331844 |
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| End bp | 2333619 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641264529 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001529812 |
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| Protein GI | 158521942 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGAAAC GAAAAAAAAT ACTGCACCAG ATCTACCCCA CCTATCTGGT GGTTACCTTC
GGCTCCCTTT TTGTTGTCAT ATGGTTTGTT TTCCATACAC TCAATGGATT ATTTCTTGAT
GAAACCCGCC GGGACCTTAC CGCCAGGGCT GAACTGATCA AACATCACAT TAAAGCCACC
GGGCTGACAG AGCCGGCCCT TGACGCCTGG TGCAAGACGG CGGGCAGTGC CGCCAAAACC
CGCATCACCC TTGTGTTACC CTCAGGCCGG GTGGTGGCCG ACTCCGAAGA GGATCCGGCC
CGGATGGAAA ACCACACCGA CCGGACGGAA ATTTTACAGG CATTGCAAAC CGGGTCCGGA
AGTTCCCTGC GATACAGCGC CACCCTGAAA ACACAGATGA TGTACGTGGC GTTGCCGATG
ACCGGAGAAA ACAGTGCCCG GCTGGTGGTT CGCACCGCTC TGCCGGTGAC CTCAATTTAC
AGTGCCCTGG GCGGCATCAA ATTCAACATA TTTGCCGTGG CCCTGGTGCT GGCCCTGCTG
GTGGCCCTGG TAAGCCTGGT CATTTCCCGG AACATCGCCC TGCCGATCCG GGAGATGGAA
CAGGGCGCCA GGCGGTTTGC CGGCGGGGAT CTTTCTTCAA AACTGGTTCT GCCCGCATCG
GCTGAACTGG CAAGCCTTGC CGAAGCAATG AACGACATGG CCGGCCGCCT GGATGATCGC
ATCAAAACCG CCATTCGGCA AAAAAACGAG CTTAACGCGG TTTTTTCCAG CATGACCGAG
GCGGTAATCG CCATCGGGAG TAATGAAAAA ATTCTGCGGG TGAATCACGC GGCCGAGACG
TTTCTGCGCA AATCCAGGCA GGCCCTGAAT GGGACATTTC TTTACGAAGT AATCCGAAAC
CACGATTTTA AAAAATTTGT CGAATCAGCG GTAAAAACCG ACCGGTCGGA GGCCGACCTG
CCCTTTGAAT TGGACGGGAA GACCCATATT ATCAACATTC ATGCCAGCGC CCTGGTGGAT
GAAACCGGGG AGCGCATGGG CGCACTGCTG ATCCTCAACG ACGTAACCCG AATGCGCCAG
CTGGAAACCA TGCGCAAAGA CTTTGCCGCC AATGTTTCCC ATGAACTCAA AACCCCGCTG
ACCTCCATCC AGGGCTTTAC CGAGACCCTG CTGGCCGAGC CATCCCTTCT GGACAACGCC
CATGTGGTCC GCTGCCTTGA AATTATCGCC AACAACACAA AGCGTCTGAC AACCATTATC
GACGACCTGC TCAAGCTGTC GGAAATTGAG CACGCGGACC GGCAGAAGGA CTTTAACTTT
CAGGAAGCGC CCCTGGCTGA TGTGATAAAT TCAGCGGCGG CCATCTGCAG GCCGGACCTG
GACTCAAAAC AGATAAAACT GGAAAGCGAC TGCCCCGCCG ACCTGGCACT GCCCATTGAC
CCGTTTCTCC TGGAGCTGGC CCTGGTCAAC CTGGTGGAAA ACGCCGTCAA ATACAGTCCA
AACAACAGCG AAGTGGGGAT TTCAGCCGAG GACAAGGGCA GGGAGGTTCA TGTCTCTGTG
ATCGATCACG GCACAGGCAT TGCCGAAGCC CACATCCCCC GGATATTTGA ACGGTTCTAC
CGGGTAGACA AAGCCCGAAG CCGCGAACTG GGCGGCACCG GCCTGGGGCT TGCCATTGTC
AAGCACGTGG CCCAGATTCA CGGCGGCAGA ATTGAGGTTC AAAGCACACC GGGTAAGGGT
TCTGCCTTTA CCCTGATTTT CCCCCGGCCG ATGTAA
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| Protein sequence | MKKRKKILHQ IYPTYLVVTF GSLFVVIWFV FHTLNGLFLD ETRRDLTARA ELIKHHIKAT
GLTEPALDAW CKTAGSAAKT RITLVLPSGR VVADSEEDPA RMENHTDRTE ILQALQTGSG
SSLRYSATLK TQMMYVALPM TGENSARLVV RTALPVTSIY SALGGIKFNI FAVALVLALL
VALVSLVISR NIALPIREME QGARRFAGGD LSSKLVLPAS AELASLAEAM NDMAGRLDDR
IKTAIRQKNE LNAVFSSMTE AVIAIGSNEK ILRVNHAAET FLRKSRQALN GTFLYEVIRN
HDFKKFVESA VKTDRSEADL PFELDGKTHI INIHASALVD ETGERMGALL ILNDVTRMRQ
LETMRKDFAA NVSHELKTPL TSIQGFTETL LAEPSLLDNA HVVRCLEIIA NNTKRLTTII
DDLLKLSEIE HADRQKDFNF QEAPLADVIN SAAAICRPDL DSKQIKLESD CPADLALPID
PFLLELALVN LVENAVKYSP NNSEVGISAE DKGREVHVSV IDHGTGIAEA HIPRIFERFY
RVDKARSREL GGTGLGLAIV KHVAQIHGGR IEVQSTPGKG SAFTLIFPRP M
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