Gene Dole_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1927 
Symbol 
ID5694767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2328409 
End bp2329293 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content58% 
IMG OID641264525 
Productphosphate ABC transporter, inner membrane subunit PstA 
Protein accessionYP_001529808 
Protein GI158521938 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0747671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA TCCATCAAAA ACCTGCCGGA CTTCAAAAAC GGCGCCTGCT TGAGGGCCTG 
TTTTTCTGGC TGTTCCGGGG CGCCGCCGTG GTCAACGGCC TTGCCCTCTT TGTTGTCGGT
TATTTTGTCA TCTCCAACGG GGCGGAAGCC ATCAGCTGGG AGTTTCTCAC TCAGCCGCCT
ACCGACTCCA TGACAAAAGG CGGCATCTTC CCCTGCATCC TGGGCACATT CTACCTGGCC
GCCGGCGCCA TTTGCTTTGC CCTGCCTATT GGTGTGGCAT CGGCCGTTTA TATGAATGAA
TACGCCGCAA AGGGCCGGGT GCTGCGCATC ATCCGGTTCG GCATCAACAA CCTGGCCGGG
GTTCCCTCCA TCGTGTTCGG CCTGTTCGGC CTGGCTTTTT TCTGTATCGT GCTCGGTTTG
GGTGTCAGCC TTCTGGCCGG CATCCTGACC CTGGGTGTGC TCACCCTGCC CGTAATCATC
GGCGCCACCG AAGAGGCGTT AAAAGCCGTG CCGGACGACT ATCGCAAGGC ATCCCTGGCC
CTGGGCGCCA CCCAGTGGCA GACCATCTAC CGGGTGGTGC TGCCGGCGGC CATACCTGAA
ATTCTTACCG GCGCCATTCT CGGCCTGAGC CGGGCCGCCG GAGAGACCGC GCCCATCATG
TTTACGGCAG CGGTTTTCTT CACCCCGGTT CTTCCGTCTT CGCTGTTTGA CGAAGTCATG
GCCCTGCCCT ATCATATCTA TGTACTGGCC ACGGCGGGAA CGGATATCGC CCTGACCCGG
CCCTTACAAT ATGGTACCGC TCTTGTACTG ATTGTCCTGG TATGCGGCAT GAACCTGTTT
GCCATCATCA CCCGGTCTAA AATGCGAAAA AAGCTGAAAG GATAA
 
Protein sequence
MNTIHQKPAG LQKRRLLEGL FFWLFRGAAV VNGLALFVVG YFVISNGAEA ISWEFLTQPP 
TDSMTKGGIF PCILGTFYLA AGAICFALPI GVASAVYMNE YAAKGRVLRI IRFGINNLAG
VPSIVFGLFG LAFFCIVLGL GVSLLAGILT LGVLTLPVII GATEEALKAV PDDYRKASLA
LGATQWQTIY RVVLPAAIPE ILTGAILGLS RAAGETAPIM FTAAVFFTPV LPSSLFDEVM
ALPYHIYVLA TAGTDIALTR PLQYGTALVL IVLVCGMNLF AIITRSKMRK KLKG