| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1885 |
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| Symbol | |
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| ID | 5694725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2283714 |
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| End bp | 2287262 |
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| Gene Length | 3549 bp |
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| Protein Length | 1182 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641264483 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001529766 |
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| Protein GI | 158521896 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCC CGGTGACCGG TCCTGATTTT GTCCATCTGC ACGTTCATAC CGCCTACAGC
CTTTTGGACG GCATCATTCG CATCGAGGCC TTGATGAAGC GGGCCGTTGA ATACGGCATG
GGCGCCGTTG CCATCACTGA TCACGGCACC ATGTTCGGTG TGGTCTCCTT TTACAAGGAG
GCGGTCAAAG CCGGTATCAA GCCGGTCATC GGGTGCGAGT GTTACGTGGC GCCCCGCTCC
ATCACCGACA GAACCCCAAT GGATCACGAC GGCCTGTCCC ACCTGGTGCT GCTGGCCGAA
ACCATGGAGG GATACCGCAA CCTGTGCCAC CTGGCCAGCA TCGCCTCTCT TAAGGGGTTT
TATCATAAGC CCCGCATCGA CAAAGAGTTG CTGAAACAGT ACGGTAACGG CCTGATCGGG
CTGTCCGCCT GCCTCAAGGG GGAGGTGGCC CAGCGCCTTC TGGAGGGCAA CACCGAGGCC
GCTGACCGGG CGGCCCGTTT TTATCAGGAG GCGCTGGGTG AAAACAGCTT TTTCCTGGAG
GTCCAGAACA ACGGTATCCC CGAGCAGACA AGGCTCAACG CGGCCCTGCG GGAGATGAGC
GACCGGCTCT CCATTCCCCT GGTGGGCACC AATGACTGCC ACTACCTGGA CCGGGAAGAC
CACAACATTC ATGACCTCTC CCTCTGCCTT CAGACCGGCA AGACCATCCA CGACGCCGAC
CGGTTCCGGT TCGAAACCGA TCAGTTGAAT TTCAAGCCCA AACACGAGAT GTGTACCTTT
CTGGAACCGT TTCCGAATGC GGCCACCAAC ACCGTGGCCA TTGCCGACCG GTGTAACGTG
GAGCTTGATT TCAAGACCCT GCATTTCCCC GTGTTTGCAA CCCCCCCGGG CAAGACCGTG
GACCAGCTGT TTGAGGAAAC GGTGCGGGAA GGTTTTGCCC GGCGCCTGAA GGCCGTGGCC
CGGAAAAACC CGGACTTTGA CCGGGAGGCC TACGACCGGC GACTGGAGTT TGAACTTTCG
GTGATTACGG ACATGGGCTT TCCCAGCTAT TTTCTCATCG TGGCCGATTT TATCGCCCAT
GCCAAGGAAA ACGGTATTCC CATCGGCCCG GGGCGCGGGT CGGCGGCCGG CAGCATCGTC
TCTTACGCCA TGGGGATCAC CGACCTGGAC CCCATTGAGC ACGGCCTGCT GTTTGAGCGG
TTTTTAAATC CCGAACGCAA GAGCATGCCG GATATTGACG TGGATATCTG CATCATCGGC
CGGGAGCGGG TTTATCATTA CCTGGTGGAA AAATACGGCG GCAGCGACTA CGTGGCCCAG
ATCATCACCT TTGGCTCCAT GAAAAGCCGG GCCGTGATCC GGGACGTGGG CCGGGTGATG
GGCATTCCCC TGTCCGACGT GGACCGGATC GCCAAGCTGA TTCCCATGAA CAAAAGCCTT
GACGAGGCCC TGGCCGAAGA GCCGGACCTG AAAAAACTGG TGGACTCCCG GCCCGACTTT
GCCGAACTCG TAGCCGCGGG CCGGGCGCTG GAAGGGATGC CCCGCCACGC CTCCACCCAC
GCCGCCGGCG TGGTGATCGG CGACAAGCCC CTTACCGAAT ACCTTCCTCT TTACGCGGTC
AAGGAAAACG AGGCCCTCAC CCAGTACGAC ATGAAGTGCG TGGAGGCCAT CGGCCTGGTC
AAGCTGGACC TGCTGGGCCT GCGCAACCTC ACGGTGATCG CGGACACCTT GAAAATTCTT
CAGCAGCAGG GCCGGCAGGT TCCGGACATG TCTCACCTGG ACCTGGCCGA TGAAAAGACC
TACCAGCTGC TCTGCGCGGG TAAAACCACC GGCGTGTTCC AGCTGGAAAG TACGGGAATG
AAGGAGCTGC TCCTGAAACT GAAGCCCACC ACCTTTGCCG ATATCACGGC CCTGGTGGCC
CTTTACCGGC CCGGCCCCAT GGGCAGCGGC ATGCTGGTCG ATTTCGTGGA GTGCCGCCAC
GGCCGCAAGC GGGTGGAATA CCTGATTCCC GAACTGGAGC CGATTCTAAA AGAGACCTAC
GGCGTTATCG TTTACCAGGA ACAGGTCATG CAGATCGCCC AGGCCGTGGC CGGGTACACC
ATGGGCACCG CCGATGACCT GCGCAAGGCC ATGGGCAAGA AGATCGCCGC CAAAATGGCC
GAGCATCAGG CCACTTTTAT CGAAGGGGCC CTGGCCCGGG GCATCGACAA GGCCAAGGCT
GAAACCCTTT ACGAACAGAT CAAGTTTTTC GGCGAGTACG GGTTTAACAA GTCCCACAGC
GCCGCCTACG CCCTGGTGGC CTTTCAGACC GCCTATCTCA AGGCCCATTT TCCCGTCGAA
CTGATGGCGG CCCTTCTTAC CAGTTCCACG AACAAGACCA TTGATGTGGT CAAGTTTATC
GCCGAGTGCC GGGCTCTGGA CATCGAGGTG CTGCCGCCGG ACATCAATGA AAGCGAAGTG
GCTTTTTCCG TGGTGGGCGA CAGGCTTCGT TTTGGCCTGC TGGCGGTCAA GAACGTGGGC
GAGGGGGCCA TCGAAGCCAT TGTGGAGGAG CGGCGGGCCA ACGGCCGGTT TGTCTCGATT
TTTGATCTGT GCGAACGGGT CCCCCTGACC AAGGTCAACA AGAAGGTGCT GGAGAGCCTG
GTCAAGTGCG GGGCACTGGA CTCCACCGGC GCGGGCCGTG CCCAGATGAC GGCGGTTCTG
GAAGACGCCC TGGCCCACGG CCAGACGGTT CAGCGGGAAA AAAACGACAG CCAGATGAGC
CTGTTCGACA TGCCGGGCGC CGACGCGGCC CTCAACGCGC CAACCCTGCC GGACATGCCG
GAGTGGTCTG ACCGCCAGCG GCTGGCTTTT GAAAAAGAGG TCCTGGGGTT TTACGTCAGC
GGTCATCCCC TGGCCGCCTA CCGGGATGTG CTGCGCAAAT ACGCCAATAC CGACGCCCTG
ACCTTAAAGG AAATAGCGGA CCAGAGCAAC GTGATCATCG GCGGCGGCAT TACCGTGGTG
AACCGAAAGA CCACGAAAAG GGGCGACCAG ATGGCGATCG TGACCATCGA AGACATGTAC
GGCACCGTTG AGGTGGTGGT GTTTCCCGAC CTGTTCGAGG TGGTGCGGGG GTTTTTGGCC
GAAGACGCCC TGGTGTTTGT TCAGGGAAAG CTTGAATCCA GTGAAGTGTC CACCGCTATT
CAGGCCGAGC GGGTGGTGCC CCTGGACCGG GCCGAAGATG TCTGGCTCCC CAGCGTACAC
TGCACCATCG ATCCCGTGAA AACCGACAAA CAGACCCTGC GAAAGCTGCA CGAGGTGTTC
AAACAGCATG CCGGCGCCTA CAGTGCCTTT CTTCACATTA CGGCGCCGCC CGGAAAGGCG
GGCACCCTGA TTGCGCTGCC CGACACCATG AAGCTGGACT CAGATGCCGC GCTCTTCGAC
AAGGTCAACG ACCTTTTGGG TTACAGCGCG GTCCAGGTCT CCTGTAAGCT GATGCCCGGC
GCGGAAAAGT GGAGTGCCCC GAAAAGAAAG AATTTTAATG GAACATACTA TAGAAAAAGG
ACCCCATGA
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| Protein sequence | MIAPVTGPDF VHLHVHTAYS LLDGIIRIEA LMKRAVEYGM GAVAITDHGT MFGVVSFYKE
AVKAGIKPVI GCECYVAPRS ITDRTPMDHD GLSHLVLLAE TMEGYRNLCH LASIASLKGF
YHKPRIDKEL LKQYGNGLIG LSACLKGEVA QRLLEGNTEA ADRAARFYQE ALGENSFFLE
VQNNGIPEQT RLNAALREMS DRLSIPLVGT NDCHYLDRED HNIHDLSLCL QTGKTIHDAD
RFRFETDQLN FKPKHEMCTF LEPFPNAATN TVAIADRCNV ELDFKTLHFP VFATPPGKTV
DQLFEETVRE GFARRLKAVA RKNPDFDREA YDRRLEFELS VITDMGFPSY FLIVADFIAH
AKENGIPIGP GRGSAAGSIV SYAMGITDLD PIEHGLLFER FLNPERKSMP DIDVDICIIG
RERVYHYLVE KYGGSDYVAQ IITFGSMKSR AVIRDVGRVM GIPLSDVDRI AKLIPMNKSL
DEALAEEPDL KKLVDSRPDF AELVAAGRAL EGMPRHASTH AAGVVIGDKP LTEYLPLYAV
KENEALTQYD MKCVEAIGLV KLDLLGLRNL TVIADTLKIL QQQGRQVPDM SHLDLADEKT
YQLLCAGKTT GVFQLESTGM KELLLKLKPT TFADITALVA LYRPGPMGSG MLVDFVECRH
GRKRVEYLIP ELEPILKETY GVIVYQEQVM QIAQAVAGYT MGTADDLRKA MGKKIAAKMA
EHQATFIEGA LARGIDKAKA ETLYEQIKFF GEYGFNKSHS AAYALVAFQT AYLKAHFPVE
LMAALLTSST NKTIDVVKFI AECRALDIEV LPPDINESEV AFSVVGDRLR FGLLAVKNVG
EGAIEAIVEE RRANGRFVSI FDLCERVPLT KVNKKVLESL VKCGALDSTG AGRAQMTAVL
EDALAHGQTV QREKNDSQMS LFDMPGADAA LNAPTLPDMP EWSDRQRLAF EKEVLGFYVS
GHPLAAYRDV LRKYANTDAL TLKEIADQSN VIIGGGITVV NRKTTKRGDQ MAIVTIEDMY
GTVEVVVFPD LFEVVRGFLA EDALVFVQGK LESSEVSTAI QAERVVPLDR AEDVWLPSVH
CTIDPVKTDK QTLRKLHEVF KQHAGAYSAF LHITAPPGKA GTLIALPDTM KLDSDAALFD
KVNDLLGYSA VQVSCKLMPG AEKWSAPKRK NFNGTYYRKR TP
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