Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1880 |
Symbol | |
ID | 5694720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2278858 |
End bp | 2279709 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641264478 |
Product | apurinic endonuclease Apn1 |
Protein accession | YP_001529761 |
Protein GI | 158521891 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATATG TGGGCGCCCA CGTCAGTGCC GCGGGCGGAG TTGAAAACGC CCCCCTTGCC GCGGCCCGGA TCAGGGCCAG GGCCTTTGCC CTGTTTACCA AAAACCAGCG CCAGTGGCGG GCCGCCCCTC TTAAAGAAGA GAGTATTACC GCGTTCAAAC GCAACTGCGC CGACCACGGC TACCGTCCGG ATCACATCCT GCCCCACGAC AGCTACCTTA TAAACCTGGG CCACCCCGAG GCCGATAACC TTAAAAAATC GCGAACCGCC TTTTTTGATG AAATGAAGCG GTGCGAGCAA CTGGGCCTGA AGTTTTTAAA TTTTCATCCC GGCAGCCACC TGGGAAAAAT TTCCGAAGAC GCCTGTCTTT CCCGTATCGC CGAATCCGTC AACATGGCCC TGGACCGGAC AGCCAGCGTG TGCGCGGTCA TTGAAAACAC CGCCGGCCAG GGCACCAACC TGGGCCACCG GTTCGAGCAC CTGGCCCGCG TCATCGATCA GGTAGAAGAC AAGACCCGGG TTGGCGTGTG CCTGGACACC TGCCACACCT TTGCCGCCGG CTACGACCTG CGCACGGCGT CCACCTATGA GGCCACACTG AAGGCCTTTG ACCGGGTGGT GGGGCTTAAA TACCTGCGGG CCGTTCACCT GAACGACTCC ATAAAAGGTT TGGCCTCCCG GGTGGACCGA CACCAGAGCC TGGGGCAGGG CGCCTTAGGG CTTGACGTGT TTCGCCGGAT CATGAACGAC AGACGGTTTG AGAACATGCC CCTGATCCTG GAGACAAAAG ACGCCACCAT CTGGGAACAG GAGATCAAGT TGCTTTACGG TATGATAAAA GGGGCGAAAT AG
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Protein sequence | MKYVGAHVSA AGGVENAPLA AARIRARAFA LFTKNQRQWR AAPLKEESIT AFKRNCADHG YRPDHILPHD SYLINLGHPE ADNLKKSRTA FFDEMKRCEQ LGLKFLNFHP GSHLGKISED ACLSRIAESV NMALDRTASV CAVIENTAGQ GTNLGHRFEH LARVIDQVED KTRVGVCLDT CHTFAAGYDL RTASTYEATL KAFDRVVGLK YLRAVHLNDS IKGLASRVDR HQSLGQGALG LDVFRRIMND RRFENMPLIL ETKDATIWEQ EIKLLYGMIK GAK
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