Gene Dole_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1869 
Symbol 
ID5694709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2261964 
End bp2263439 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content49% 
IMG OID641264467 
Producthypothetical protein 
Protein accessionYP_001529750 
Protein GI158521880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAAGTT TGGATTTGAT TAGAAAAGAT TACACCAAAT GGCAACGCTT GGCTAACGTG 
CTGATGGCAC TTTGTGCCGC CTATTATATT GTCGCATTTG TTGTTCTTGC ATCAATACGA
GCGTTTACTC TGTTTGAGTA CAATGGGATA GAAGGGTTTC ACTTGGCGCA GGTGCATTGG
CTGCTTGCGG GGAACCCTCT TTATACAGAG CCCTCACTTG AGTATGTCCC TATTCTTTAT
GGCCCGCTCT ACGCCTATGT GTCTTCCGCC TTTGTTTTCA TCCTGGGCGA GCATTACGGG
ACGCTTCGGC TGGTTTCCCT GCTGGCGACC CTGGGCACAC AGATCATTCT TGGGTGGATG
GTCTGGCGAA AAACCCGTTC CCTGCTAGGG GCGTTTGTTG CGGCAGGACT ATACGCTGGC
ATGTATGGGG CCACCGGCTT TTATTATGAC ATGGCCCGGG TCGACGCCCT GTATGTTTTT
TTGACAACCG CGGCTGCCTG CGCCATCTGG GTTGCCTCTG AAAAAGGCGG GACGGCGACA
TTTATCGCGG CAGTGGCGGC CACCGGCGCC GTGCTTACAA AACAGACGGC CCTGCTTCCC
GTTGTCGTCC TCTGCCTGTG GAGCCTTATC CTCAACACAA AAAAGACAAG GGCAACAGCC
CTTCTGTGCC TAGGAAGTGT CCTGGCAAGC CAGACAATTC CAGCCTTTAT GGGAAACTCG
TGGTTCTACT ATTATCTTTA CAAGGTGCCA TCCACCCACC CGCTTTTCAT GAGCAATTTT
TTTTCTTTTA TTGATGAGTC TACACGATAT CTGAGTATCG GCCTGATTCT GACCGGTGTT
GTGCTGTTTC TGCTGTTAAA AAAAACAGAT GGAAAGAAAA ATGCATTCTT CTTTCTGCTT
CTTACTCTCG CTATGCTGGT TGCGGGGCTT GTGCCCTACC TGAAAGTCGG CGGCGAAATC
AATAACCTGA TGCCCCTGGC GGTTGTCATT GCCCTCTGCT GTGGGCTGAC GGTGGGGATG
ACCCGAAAAT CCAAAAGTCG GTATTCACTT TTTGTCGTTT TCGCGCTACT TTGTTTTAAT
ATTCAGATTT TTTACTTGCC ATGCAAGGCT CTCCCCGCTC CAGGGGCATT AGCACAAACA
AAAACAGCCA TTAAGGTGTT TCGTCGACTG GAAGCCCCCA TCTTTGCGCC TTTTCAGGCA
TATCTTCCCT TGCTGGCTGG AAAAAACGGG TCTGCCTTCT GGATGCCGAC AACTGACATC
TTACGCGCAA AAGACGAACT TGGGAATCTT CTGGAAGAAA AACTTCGCAG GGCATTTAAA
GAAAAACGGT TTCGTTTCGT TGTTTTACCA AACAACATCC CGAGAAAAAA AGACTTTCCT
TACCTGCTGA AAAACTATCG GCCAGCAAAT TCCGATGGCG TAAACGGCAT TCAGGAAGCA
ATCGGCAATC TCTCCATATA TGTGCCACGA GAGTGA
 
Protein sequence
MSSLDLIRKD YTKWQRLANV LMALCAAYYI VAFVVLASIR AFTLFEYNGI EGFHLAQVHW 
LLAGNPLYTE PSLEYVPILY GPLYAYVSSA FVFILGEHYG TLRLVSLLAT LGTQIILGWM
VWRKTRSLLG AFVAAGLYAG MYGATGFYYD MARVDALYVF LTTAAACAIW VASEKGGTAT
FIAAVAATGA VLTKQTALLP VVVLCLWSLI LNTKKTRATA LLCLGSVLAS QTIPAFMGNS
WFYYYLYKVP STHPLFMSNF FSFIDESTRY LSIGLILTGV VLFLLLKKTD GKKNAFFFLL
LTLAMLVAGL VPYLKVGGEI NNLMPLAVVI ALCCGLTVGM TRKSKSRYSL FVVFALLCFN
IQIFYLPCKA LPAPGALAQT KTAIKVFRRL EAPIFAPFQA YLPLLAGKNG SAFWMPTTDI
LRAKDELGNL LEEKLRRAFK EKRFRFVVLP NNIPRKKDFP YLLKNYRPAN SDGVNGIQEA
IGNLSIYVPR E