| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1855 |
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| Symbol | |
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| ID | 5694695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2243527 |
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| End bp | 2244306 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641264453 |
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| Product | peptidase A24A domain-containing protein |
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| Protein accession | YP_001529736 |
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| Protein GI | 158521866 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.120379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACCGG AAACCCTTAT CGGCGCGGTG CTGTTTGTTT TTGGCGCGTG CATCGGCAGT
TTTTTAAATG TCTGTATCTA CCGGCTCCCC CTCTCCCTGT CCATCGTGTT CCCCCCATCG
GCCTGCACCC AGTGCAAACG GCCCATTGCG GCCTGGGACA ACATTCCCAT TATCAGCTAC
CTGGTTCTGC TGGGCCGGTG CCGGCACTGC CGCATGCCTA TTTCCATGCG CTATCCCCTG
GTGGAACTGA TCACCGGCTT AAGTGCCGTG GCCGTATACA TCAACTTCGG GTTAACCGCG
GAGAGCCTTG TCTATTTTGT TTTTATCGCG TCCCTTATCG TTGTAATCTT TATCGACATT
GATTACCAGA TCATTCCGGA TGTGATCTCC CTGCCCGGAA TTCCCATTTT TTTTCTGGCA
TCGGTCTTTA TCGTCCGCGC CACGGTAACC GATTCGCTTC TGGGCATCCT GGCCGGCGGC
GGCAGCCTGC TGGCCGTGGC CGTGATCTAT CGACTGATCA CCGGCAAGGA GGGCATGGGC
GGGGGAGACA TCAAGCTGCT GGCCATGATC GGGGCGCTGT GCGGCTGGCA GGGGGTGCTG
TTTACCATCT TTACCAGTTC TCTTGCCGGC ACGGTTGTGG GCATGGTTAT CATGGCGATG
CAGAAAAAGA ACATGAAACT GGCCCTGCCG TTCGGCCCGT TTCTGTCCAT GGGCGCCATT
GTCTATCTGT TTTTCGGGCC GGAGCTGGTG GCCTGGTATC TGAATATGTT ACGGTCATAG
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| Protein sequence | MIPETLIGAV LFVFGACIGS FLNVCIYRLP LSLSIVFPPS ACTQCKRPIA AWDNIPIISY
LVLLGRCRHC RMPISMRYPL VELITGLSAV AVYINFGLTA ESLVYFVFIA SLIVVIFIDI
DYQIIPDVIS LPGIPIFFLA SVFIVRATVT DSLLGILAGG GSLLAVAVIY RLITGKEGMG
GGDIKLLAMI GALCGWQGVL FTIFTSSLAG TVVGMVIMAM QKKNMKLALP FGPFLSMGAI
VYLFFGPELV AWYLNMLRS
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