Gene Dole_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1852 
Symbol 
ID5694692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2239745 
End bp2240593 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content57% 
IMG OID641264450 
Producthypothetical protein 
Protein accessionYP_001529733 
Protein GI158521863 
COG category[S] Function unknown 
COG ID[COG4254] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.428196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACG ACCGCAAAAA CGTTTTTATC AAAGGAACGA TTTTCATGGC TGTTGTGCTG 
TTGTTGGGCT GCATGACGCC AGGCCCGGCA ATTGCCGGCG CCATTCCAGG CGGGTTGATG
ATTCAATCCG GTTATGCACC GGGTGCCGGT GTACCGGTGG GAAAAATCCG CACGGTGCAC
GGAAAGGCCT TTATCATGCA CGCGGACCGC CAGGCGGTTT ACCCGGTAAC GGCGGGGCTT
GCCGTTTACC AGGATGATAC CCTGGTCACG AAAAAAGGAG GGCGGATCGT TCTGGTGCTC
AACGATGACA GCGTTCTGAC TCTGGGTCCC GAAACTGAAA TGGTGCTGGA CCAGAGCGTT
TTCGATCCCG GTGCGAGCAA CAGATCGGTG CTGGTCAACC TGCTGACAGG CAAGGCCCGT
TTTTTTGTAA AAAAGTTCGC GGCCCTGAGA AACTCCACCT TTAAGGTGCG TACCGCCACA
TCAGTGGCAG CGGTGCGGGG CTCGGATTTT ATCATTCAGC AGGTGGGAGA CAAGACCATC
ATCACCACCC TTGGCCAGAC CGTGCTGGAG GTCTCCAACC CCAATTTTCC GCTGGCCGAA
CCGGTAGTGG TGAACTCCTT TGAACAACTG ATTGTTACAC TGGGCCAGCT GCCGGGCAGC
CCGATCCAGG TGACACCGGA AGAGATTCAG GCAATTCTGG AGTCTTTGGG TATTCCCACG
GGCGGTCCGG GAACCGGGGG GGGCGCCGAC GATGATGATG ACGATGATGA TACCGGCATG
ACCGGTGTTC CGCCGGAACC ACCGAGCTTT CCAGAGCCCA CACGTCCGGT GTCGCCGTAT
ACACCTTAA
 
Protein sequence
MKNDRKNVFI KGTIFMAVVL LLGCMTPGPA IAGAIPGGLM IQSGYAPGAG VPVGKIRTVH 
GKAFIMHADR QAVYPVTAGL AVYQDDTLVT KKGGRIVLVL NDDSVLTLGP ETEMVLDQSV
FDPGASNRSV LVNLLTGKAR FFVKKFAALR NSTFKVRTAT SVAAVRGSDF IIQQVGDKTI
ITTLGQTVLE VSNPNFPLAE PVVVNSFEQL IVTLGQLPGS PIQVTPEEIQ AILESLGIPT
GGPGTGGGAD DDDDDDDTGM TGVPPEPPSF PEPTRPVSPY TP