| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1838 |
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| Symbol | |
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| ID | 5694678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2222633 |
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| End bp | 2224990 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641264436 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001529719 |
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| Protein GI | 158521849 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCAA TAAGTCGATT TTTATATCTG GCAACCCTGG TCTTTGCGCC CCTGGCGTTC
GGCAGCGTGG AGTCCTGGGC CTTCTTCTTC CTGACCCTGC TCACCGGTGC CGCCATCAGC
TTTTACCTGC TTCACACCCG GCGCCATGCC GCCCCCATCT ACCGGGTACC CTGCATGTTA
CCCCTTGCCC TGCTTGGGCT TTTCATCTTC TTGCAGATCA TCCCCCTGCC GCAGGCTGTC
CTGTCCCTTT TGTCTCCCAA CGCCGCCCAG CTCCGCAACG AAACCATCGG CATTCTTCTA
CCGGACCGTG CCTGGCCCCT TACACTGAAC CTTCACGCCA CCCTGTTTGA ACTCTGTCGC
TGGCTGCTGT GGGTCGGTTT CTACTGGATT TCTGTTCAGC TCCTGTCGGA CAAAGCAATG
TTGCGCCGCA CCCTGCTGTT TCTGGCCTTT TTTGCCGGCA TTTTTGCCTT TTCGTCCATC
CTTCAGCACA TTTTCACAGA CAACCGTGCT TTATGGTTCC GCTATATATC CGTGCAGTCC
TGCTCGATAT TTGGCTCCTA TATTAACCGC AACCACTACG CCGGCCTTAT GGCCATGCTT
TTTGGTCCCA CCCTTGGCCT GTTGCTGGCG CTTCGCCCCC CCCGTCAGTT CGGCACCATG
CGCGAAAAAA TCCTGGGCCT GTTTGAAGAA AAAGAGACCC CCCTGTTTAT TCTTCTTCTG
CTTTCGGCAT CAATCATGGT GATGTCGGTT TTTATCAGTC TCTCCAGGGG CGGCATGACC
AGCCTGTGCA TATCCAGCCT GTTTTTTATT CTGATGGCAT CCGGAAAAAA ATTTTCAGGA
CGCCACACAA AAATGAAAAT CACCGCCGCA ATGCTGCTGT GCGCCGTTCT GATGGCCCTC
ACCTGGGTCG GCTGGGAAAC AATTGACAAT CGCTTCAGCA CCATCTATGC GGCAGATGAT
ATCATGCGCA TTGGCCGGCT CCGATACTGG GGCAGATGCC TGGCCGGCGG GCTGGATTTT
TTGACCACCG GTGTTGGTTT TGGTGCCTTT GAAGTGGCCG GACCCATCTA CCAGACCTAC
TATATGGGAG CCATCCTGGA CCATGCCCAC AACGACTACC TGGAGCTGCT TATAGAAGGC
GGTATCCCCG GTGTTCTGCT GTTTCTTGTT TTTTTTCTCT GCCTTTTCCA GGTTGTGCAG
AAAACCCTAA AAAAGAGAAA AGAGTCCTAT TCCATTCTGG TCTGTATCGG CGCCATTACC
GGTATTGTAG CCATCCTGCT GCACAGCTTC ACAGACTTCA ACCTGCATAT TCCCGCCAAC
GCCCTTTATC TTGCCTTTCT CTGCGGCCTG GCGGTTGCCG CGGCCCACAC CCGGCTGCGA
AACCACATCA CCCCGCCCAC CTACCTGCCA CCCGCGCCAA ACAGGGCAGC CCTTGTCACG
CCTTTTCTGT TTATCCTGCT CTGGCCGCCG CTTCTGGCGC TGTCTATGGG CCAATGGATG
GCCGATCAAC ACATCCAGCC CTTTATAAAG GCCCCCCTGA ACAACACCAC TGCCCCGGCC
CTGCTGGAAC AGGCTGCCGA AAGCGCCCGC CGTGCCACCG CCTTCTCACC ATGGAGCGCA
ACCGCCCACA CACTTCTCGG AGACGCCGCC TTTTTCTCCG GCAACCCGGA ACAGGCACTG
GACGCCTATC AGCAGGCCCT CTGTTTTACA CCCACCCGAT CAACACTGCT TCAAAAGGCC
GGCCAGGCCG CCCGCAATGC CGGCCTGCCC CTTTCCCGGG CCGAGGCCCT TATGGCCGCC
GGTGTAAAAA CCTATCCCAT GCGACCCGGC GCGCATGGCG CCCACGCCGG GTTCCTGTTT
GAAACCGGCA ATAAGGAAAA GGCCATGTCC GTGGTTCGAA CTGGTATTAA AACCCATCCT
TCCCTGGCGC GACAGTTTTT TACCCTGATG ACTTATGCCG GCCTCACCCC CGCGGAAATG
TTTACAGCCC TGCCTGCAAA TTCTTATGTG CTGACCCAGT TTGCCGCCCA TATCCAAAAC
ACCGATTACG ACTTTATGCG AAGAACCATT CTGACCGCCG CCGTGAATGC CGCCGACCAG
GAAGCCGAGC CCTCGCCAAA GGCTTATATT AACCTGGCCC ATCTTTACCT GCGGGAAAAA
AATCATGACC AGACCATTAC TGTTCTGGAA CGTGGTGTCA CCCGATTGCC GGATCACCCC
TATCTGCTTT ACCTGCTGGC CCGGACTTAT GAAGAAAACC AGATAGTCTA CAAGGCCCTG
GATCTGTATA AAAAGCTCCA GATTATTTCC CCCGGCTACC GCGACACCGA ACAACGTCTT
AAAGCCATGA AACGGTAA
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| Protein sequence | MLSISRFLYL ATLVFAPLAF GSVESWAFFF LTLLTGAAIS FYLLHTRRHA APIYRVPCML
PLALLGLFIF LQIIPLPQAV LSLLSPNAAQ LRNETIGILL PDRAWPLTLN LHATLFELCR
WLLWVGFYWI SVQLLSDKAM LRRTLLFLAF FAGIFAFSSI LQHIFTDNRA LWFRYISVQS
CSIFGSYINR NHYAGLMAML FGPTLGLLLA LRPPRQFGTM REKILGLFEE KETPLFILLL
LSASIMVMSV FISLSRGGMT SLCISSLFFI LMASGKKFSG RHTKMKITAA MLLCAVLMAL
TWVGWETIDN RFSTIYAADD IMRIGRLRYW GRCLAGGLDF LTTGVGFGAF EVAGPIYQTY
YMGAILDHAH NDYLELLIEG GIPGVLLFLV FFLCLFQVVQ KTLKKRKESY SILVCIGAIT
GIVAILLHSF TDFNLHIPAN ALYLAFLCGL AVAAAHTRLR NHITPPTYLP PAPNRAALVT
PFLFILLWPP LLALSMGQWM ADQHIQPFIK APLNNTTAPA LLEQAAESAR RATAFSPWSA
TAHTLLGDAA FFSGNPEQAL DAYQQALCFT PTRSTLLQKA GQAARNAGLP LSRAEALMAA
GVKTYPMRPG AHGAHAGFLF ETGNKEKAMS VVRTGIKTHP SLARQFFTLM TYAGLTPAEM
FTALPANSYV LTQFAAHIQN TDYDFMRRTI LTAAVNAADQ EAEPSPKAYI NLAHLYLREK
NHDQTITVLE RGVTRLPDHP YLLYLLARTY EENQIVYKAL DLYKKLQIIS PGYRDTEQRL
KAMKR
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