Gene Dole_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1828 
Symbol 
ID5694668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp2211175 
End bp2212302 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content54% 
IMG OID641264426 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001529709 
Protein GI158521839 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATA CAATTAATAT AACCACCATC ATCGGTGCCC GCCCCCAGTT CATAAAAGCC 
GCCACAGTGT CCCGGGCCAT TGCCGGGCAG GCTCAAACTG GGCAGCAGGC AACGCCCATC 
AAAGAAACCA TCATCCACAC CGGACAGCAC TTTGATGCCA ACATGTCCGA GGTGTTTTTC 
CGGGAGCTGG ATATCCCGAA GCCGGATTAC AACCTCGGCA TCGGCGGGGG CAGTCACGGC 
AGAAACACGG GCCGGATGAT CGAGGCTATT GAAGCGGTGC TTGTCAAAGA GCAGCCGGAC 
TGGGTTCTGG TCTATGGCGA CACCGACTCC ACCCTCGCCG GAGCCCTGGC CGCAGCCAAG 
CTGCATATTC CGGTGGCTCA TGTAGAGGCC GGGCTGCGTT CCTACAACCG GATCATGCCC 
GAGGAGATCA ACCGGATTGT GGCGGATCAG TTGAGCACTC TGCTGTTTTG CCCGACCCGA 
ACCGCTGTGG CGAATCTTGA AAAGGAAGGA TTCCCCCATC AGTTGACGGC CCGGACCCGT 
CAGGCAGTGG TCAACGTGGG GGATGTGATG TATGATGCGG CCCTTTATTA CGGGGGCCGG 
GCACAGGGGA AAAGCCGGAT CATACAGACC CGGGCACTGA CACCCAAAGC ATTTGTGCTG 
GCCACCATCC ACCGGGCCGA AAACACGGAC AACCCGGAGC GGCTGCACAA CATCATGACC 
GCCTTGAACC AGATCGCCGC AGAAATACCC GTGGTCCTGC CCCTTCATCC CAGAACGAAA 
CAGAAACTGG TGCCCGCTGA TTTTCCTGCA GTGACGTTCA TCGACCCGCT GGGATATCTG 
GACATGGTGA TGCTGGAAAA AAACGCTCAA GTCATTGTCA CCGATTCCGG TGGGGTCCAG 
AAGGAAGCAT ATTTTCATGG TGTGCCCTGT GTTACTGTGC GAGATGAGAC CGAGTGGGTG 
GAGTTGGTTG AGGTGAGGGT AAATGCGTTG GCCGGGTCAA AAAAAGACGA AATTATACAA 
TCATATCATT CAATGAAAAA TAAACCAGTC GAAGCAAAAT TATTATATGG CAATGGAGAC 
AGTGCCTCAA AAATAGTATC TTTTCTAACT GAATCGATAA CCGTTTAA
 
Protein sequence
MPDTINITTI IGARPQFIKA ATVSRAIAGQ AQTGQQATPI KETIIHTGQH FDANMSEVFF 
RELDIPKPDY NLGIGGGSHG RNTGRMIEAI EAVLVKEQPD WVLVYGDTDS TLAGALAAAK 
LHIPVAHVEA GLRSYNRIMP EEINRIVADQ LSTLLFCPTR TAVANLEKEG FPHQLTARTR 
QAVVNVGDVM YDAALYYGGR AQGKSRIIQT RALTPKAFVL ATIHRAENTD NPERLHNIMT 
ALNQIAAEIP VVLPLHPRTK QKLVPADFPA VTFIDPLGYL DMVMLEKNAQ VIVTDSGGVQ 
KEAYFHGVPC VTVRDETEWV ELVEVRVNAL AGSKKDEIIQ SYHSMKNKPV EAKLLYGNGD 
SASKIVSFLT ESITV