Gene Dole_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1824 
Symbol 
ID5694664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2205974 
End bp2206648 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content33% 
IMG OID641264422 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001529705 
Protein GI158521835 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTAA CAGACAATTA CATTGAAGAT TTTGAAACAT TGCATTTGGG CAAAAATCTT 
ATCATCGGAA ATTACAATAG AATCGGCAAA AATGTGTCCA TCGGTAATAA TGTTAAAATT
GGACATCATT GTATAATTGA TGATGATGTG ATTATCGGCG ATGATGTGGT TATTGAAAAT
TATGTGTTGC TGAAAAAAGA TACTAAAGTC GGTAATAATG TTAAAATAGG AGATTTTACG
CTTATAAAGT TTAATAGCAC AATTAGAGAC AACGTAATTA TAGATACACA TAACAAAATT
GGATTTAACA CGGTAATAGG TAGCGATTGT GCTTTTACCT CTTATTGTGA AGTGAGAGAT
AACTGTAAAA TTGGAAATAA CGTAAAAATG GGGAGCCGAT GTACCATTTC ATCAGGAATA
ACTGTCGAAG ATAATGTTAA TATTAAATAC AGTTTTGTCT TCACTGACAC ACCAGATTTA
AAAAATGAAA ATGAAAAAAT TTTTGGATTG ATCAAAGAAG GTGCAAAGTT TGGTGCAAAT
GTCACTATCA TGCCTGGAAT TACAATAGGT CGAAATGCAG AAATTGGTGC ATGTTCACAG
GTCAGGCACA ATGTGCCGGA CAATGAGATC TGGTATGGAA ACCCGGCAAA ATTCTTCAAA
AAATTCTCTT CATAA
 
Protein sequence
MALTDNYIED FETLHLGKNL IIGNYNRIGK NVSIGNNVKI GHHCIIDDDV IIGDDVVIEN 
YVLLKKDTKV GNNVKIGDFT LIKFNSTIRD NVIIDTHNKI GFNTVIGSDC AFTSYCEVRD
NCKIGNNVKM GSRCTISSGI TVEDNVNIKY SFVFTDTPDL KNENEKIFGL IKEGAKFGAN
VTIMPGITIG RNAEIGACSQ VRHNVPDNEI WYGNPAKFFK KFSS