| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1813 |
|---|
| Symbol | |
|---|
| ID | 5694653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2194794 |
|---|
| End bp | 2195942 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641264411 |
|---|
| Product | AAA+ superfamily protein |
|---|
| Protein accession | YP_001529694 |
|---|
| Protein GI | 158521824 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.309123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACAAC GCAAGCTGAA ATTACCACCG GCGGGGACGG AAACCTTTTT TTTGTGGGGC
CCCCGCCAAA CCGGAAAATC GACCCTCCTG AAAACGTTAT ATCCAAAGGC AGTCTGGATT
GATTTGTTAA AGGCCGAAGA ATTTCGTCGT TATCTCAACA ACCCGGAATT TCTCCGGCAG
GAATTGCCGC TAAAGGGCAA AATGCCCTTT GTTGTTATTG ACGAGGTGCA GAAACTCCCC
GAGCTGCTGG ATGAAGTCCA TTGGCTTTTC GAAAATCGAA ACGTGCATTT TGCCTTATGC
GGCTCAAGTG CCAGAAAGGT CAAGCGCGGT GCCGCCAACC TTCTGGGCGG CCGGGCCATA
CGCTATGAGC TGTTTGGTTT AAGCGCGGCA GAACTCGGCT CTGATTTTGA TCTTACCCGA
GTGCTGAACC ATGGGTACCT GCCACGGATA TATCTCGCCA AACAGCCGGA GCGGTTGCTC
AATGCCTATG TGGCCAATTA TTTGAAAGAC GAGATCGCCG CCGAAGGGCT GGTGCGTAAT
TTGCCCGTAT TTTCCGACTT TCTTAATATG GCGGCACTGT CAGACACCGA GCCGGTTAAT
TTTTCGACTA TTGCCCGCGA TTGCGGCGTT TCCAGCCAGA CCATCAGGGC GTATTTTCAA
ATTTTAGAAG ATACATTGCT GGGCCGGTGG CTGCCAAGCT TTCGAAAACG CCCGAAAAGA
CGGGTGGCGG CCTCGGCAAA ATTTTATTTT TCCGATGTGG GGATCGTCAA TGTTCTTGCC
AAACGCGGCA AACTTGAAAT CGGATCGGAG TTGTTCGGCA AGGCGTTTGA GAACTGGTGC
TTTCATGAGC TCAACGCGTA TAACATGTAT AATGAAGTAT CGGCCGCGTT TCATTACTGG
CGCCTCGCCG GTGGAACGGA AGTCGATTTT ATCATCAATA ATATGGACGT CGCCATTGAG
GCCAAGGCTT CCAGGAAAAT AACAAATAAT CATCTGAAAG GACTTAGAAG CCTGAAGGAG
GATCATTCTG TTGTTAAACG AAGAGTAGTG GTGTGCTGCG AAAATAAGCC ACGAACCACC
AGCGACGGCA TAGAAATACT TCCCGCAGAA AAGTTTCTGC AATTCTTGTG GCAGGGAAAA
CTATTCTGA
|
|---|
| Protein sequence | MIQRKLKLPP AGTETFFLWG PRQTGKSTLL KTLYPKAVWI DLLKAEEFRR YLNNPEFLRQ
ELPLKGKMPF VVIDEVQKLP ELLDEVHWLF ENRNVHFALC GSSARKVKRG AANLLGGRAI
RYELFGLSAA ELGSDFDLTR VLNHGYLPRI YLAKQPERLL NAYVANYLKD EIAAEGLVRN
LPVFSDFLNM AALSDTEPVN FSTIARDCGV SSQTIRAYFQ ILEDTLLGRW LPSFRKRPKR
RVAASAKFYF SDVGIVNVLA KRGKLEIGSE LFGKAFENWC FHELNAYNMY NEVSAAFHYW
RLAGGTEVDF IINNMDVAIE AKASRKITNN HLKGLRSLKE DHSVVKRRVV VCCENKPRTT
SDGIEILPAE KFLQFLWQGK LF
|
|---|
| |