| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1790 |
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| Symbol | |
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| ID | 5694630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2165108 |
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| End bp | 2167507 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641264388 |
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| Product | polymorphic membrane protein |
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| Protein accession | YP_001529671 |
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| Protein GI | 158521801 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAA GACTCGGTAG CTGTTGCAGA GCGTGTTTGA TCTTTGGAGT TATTTTGTGT
TTGTTTGTTT TTCTGCCGGT TGCAAGTTCT CAGGCCGCCA TTATTTATGT GGACACTGAT
GCCACCGGAA GCAATAACGG CACATCATGG ACGGACGCTT ATATCTTTTT GCAGGATGCC
CTGGCATCCG CCTCCTCCGG TGATCAGGTC TGGGTGGCTG GAGGGACATA TTATCCGGAC
GAAGGCGCAA GCCAGACCGA CGGTGACCGC GCCTCAACTT TTAATATCCC CAACAACTCG
AAAGTCTACG GCGGATTTGA CGGTACGGAA ACCAGCCTAG AGGAACGCGA TTGGGAGACA
AATGTCACTG TTTTAAGTGG GGATTTGAAT CAGGATGACG ACACAGACGG CGATAACAGT
GAAAACGCTT ACCATGTGGT TTATTCTGAG GGGGGCAGTG ATCAGACCAC ATTGGATGGT
TTTAGGATTA CTGCGGGCAA CGCCAGCGCC AGTAGTCAAC CCAACTGCTG GGGGGGAGGC
ATTTATAATA AGAACAGCGA TCCCCGATTA ATTAATTGTA ATATTATCGG TAACCATAGC
CGTGAGGCAG GCGGTGGAAT GTATAACCAA GCTTATTCCG GTACAAGTAA ACCAACTTTG
GTGAATTGTG TTTTCAGCGG CAATACTGCT AATGATGGTG CTGGGCTAAA TAATCGTAGT
TATTGGGGTA CAAATAGTCC AACGCTAATT AGATGTACCT TCAGTGATAA TAAAACTAAT
CCTTTTTCAT ATTACGGAGG CGGAGTTAAA AACCTTGGAC AATATAATGG TATAAATAAC
GCCACTTTCA TAAACTGCGA ATTCATCGGT AACAGTGCCT ACTCCGGTGG CGGAATGTAT
AATAGAGCTA TAGAGCATGG CAGCACAGTC AACCCAACGC TTATAAATTG TAGTTTTCGC
GGAAACCGCG CTGCAAATGG CGGTGGGATG CATAATTATG GTGACTGGAC GGGCACATGC
AGTCCGGTTT TAATCAACTG TACCTTTAGC GGCAATTACG CTGATAATGG TGGTGGGATA
TATAATAATC AAGATGATAC TGATGGAGGA GTATGTACGC CTGTCCTGAA AAATTGTATT
CTTTGGAACA ATTGGGCGGC CTATACACAC GGTGCTGAAG TCTATAACCG CAACGCAACT
GCTACTTACT CTTACTGTAA TATTGATGGC AGCGGCGGTA GCGCCGCCTG GGACACCGAA
CTGGGCACGG ACAACGGCAA CAATATTGAT GCTGATCCCC TGTTTGTCGA TCCGCCCGAT
CCGGCAGCCG CGCCCACCAC GGACGGCGAC CTGCACTTAA TGACTGGATC ACCCTGCATT
GATACCGGTG ACAACAACGC CAACGCCGAA CCATTTGACC TTGATGGCAA TGCCCGCATT
CAGAACAACA TCATTGACAT GGGGGCCTAC GAAGTCGCGG GGTCCCTGCC CTACCCCAAC
ATGATCAACT GGAACGGCAA CCTGGTGGCC GACTTCGGCG ACAATGGCCT GTGGTACCAC
AACGGCACAT CCTGGAACTG GATGACCAAT CGGGGCCATG TTAATCAGAT GGTGGTGTGG
GACGGCAAGC TGGTGGTGGA CTTCGGTTCC GATTACGGTA TGCACTACTA TGACGGCACC
GGCTGGAACT GGATGTCCAA CAAAGGCGAT GTGGCAAAAA TGATCGCCTG GAACAATGGC
GCAACAGAAA AGCTGGTGGT TGACTTCGGC GGGGGCCGCC GTATCTACAC CTACAACGGA
GCCTGGAGCT GGTTTAACAA CAAGGACGAC ATCAACGGCA TGCTCGTCTG GGACAACAGG
CTGGTCGTCG ATTTCGGCAA GGGCCGGGGC GTTTACAACA ACAACGGCGC CTGGAACTGG
ATGACCAACA AGGATGACGT GGCCACGGCA GTGGTCTGGG ACAACGGGTC CACCGAACGA
CTGGTGGTGG ATTTTGGCGG GGGCCGCCGG GTGTACACCT ACAACGGCGC ATGGAGCTGG
CTCACCAACA AGGATGATGT CAACGACATG GCCGTGTGGA ACAACAAGCT GGTGGTCGAC
TTTGGCAACG GCCGCCGCAT ATACACCTAT GACGGGGCCT GGTGCTGGAT TTCCAATAAA
GACGATGTAG CGAAAATGGC GGCCTGGAAC GACGGCGCCG ACAAGCTGGC CGTGGACTTC
GGCGCCGGCC GGGGCATGTA CTACTATGAC GGGTCCTGGC ACTGGATGAA GAACGCCAGC
GACGTGCCGG AGATGACAGC CTGGGGCAAC CGCCTGGCCG TGGACTTCGG ACCGGGAACA
GGTGTTTACA ACTATGACGG TTCCTGGAAC TTTATGAAAA CCTGGAGCAC GGCGGATTAG
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| Protein sequence | MKVRLGSCCR ACLIFGVILC LFVFLPVASS QAAIIYVDTD ATGSNNGTSW TDAYIFLQDA
LASASSGDQV WVAGGTYYPD EGASQTDGDR ASTFNIPNNS KVYGGFDGTE TSLEERDWET
NVTVLSGDLN QDDDTDGDNS ENAYHVVYSE GGSDQTTLDG FRITAGNASA SSQPNCWGGG
IYNKNSDPRL INCNIIGNHS REAGGGMYNQ AYSGTSKPTL VNCVFSGNTA NDGAGLNNRS
YWGTNSPTLI RCTFSDNKTN PFSYYGGGVK NLGQYNGINN ATFINCEFIG NSAYSGGGMY
NRAIEHGSTV NPTLINCSFR GNRAANGGGM HNYGDWTGTC SPVLINCTFS GNYADNGGGI
YNNQDDTDGG VCTPVLKNCI LWNNWAAYTH GAEVYNRNAT ATYSYCNIDG SGGSAAWDTE
LGTDNGNNID ADPLFVDPPD PAAAPTTDGD LHLMTGSPCI DTGDNNANAE PFDLDGNARI
QNNIIDMGAY EVAGSLPYPN MINWNGNLVA DFGDNGLWYH NGTSWNWMTN RGHVNQMVVW
DGKLVVDFGS DYGMHYYDGT GWNWMSNKGD VAKMIAWNNG ATEKLVVDFG GGRRIYTYNG
AWSWFNNKDD INGMLVWDNR LVVDFGKGRG VYNNNGAWNW MTNKDDVATA VVWDNGSTER
LVVDFGGGRR VYTYNGAWSW LTNKDDVNDM AVWNNKLVVD FGNGRRIYTY DGAWCWISNK
DDVAKMAAWN DGADKLAVDF GAGRGMYYYD GSWHWMKNAS DVPEMTAWGN RLAVDFGPGT
GVYNYDGSWN FMKTWSTAD
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