Gene Dole_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1776 
Symbol 
ID5694615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2140694 
End bp2142253 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content61% 
IMG OID641264373 
Producthistidine kinase 
Protein accessionYP_001529657 
Protein GI158521787 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACACAC AGAGCCTTCG CACCATAATC GCCATCAACC TGGCGGTGCT GATTCTTATC 
GCCACCGTGC TGTTTGACGT GGTGGCGCTC TCCACTGACC GGCAGCGGTT TATCAGCACA
AAAATCGCCG AGCACCGGCT TCTCTCCCTG GCCGTGGCCC ACCAACTGAC GGCAAAGGAT
GCGGCCGCGC CCTTTTTCCC GCCGGACACA GAGCCGGCCC TTGGCGCCCT GTTTCAAGCA
GCCGAAGTAA AGGCCGTGGT GGTGTTAAAC CCATCCGGCG GGTTTGCCCA TATCACCGGC
ATGACCGCCC CTGAACAGGT TCCCCTGGTT GAGCTGGCGG ACCGCGCTAT GCAGGAAAAA
AAACAGGTCA CAGGGCTTTA CGGCAAAACA TGGGGCGTGT TCCTGCCCCG CCCCCGGTCC
CTTTTAATCG CCGGACCGCT GATGACCGGA ACAGACACGG TCATGGGCAG CCTGGGCACG
GTGACTGACT TAAACGATCT TTACGCGGCC CAGCGGAAAG ACCAGGCCCT GCTCTTCGGA
TACGCGCTTT TCAACCTGAT CCTGCTTACC CTGCTGGGCA CCTACATCAT CGGCCGGTTC
TCGGTCAGCC CCATCAATCG CCTGGTGCGG CGGGCCGAAG AGTACCGGGA TGTGGAGGAC
CTGGGGTTTT TCTACGACCG GGGGAAAAAC GAGTTCCGCC AGCTTTCCGG CGCCCTGAAC
CGCATGCTCA AGCGCATCGG CGACGACAAG CACCGCCTTG AATCCTCACT GGCCGGCCTG
GAAAAGGCCA ACCTTGAAAT TCAGAACCGG CAGAACGAGC TGATCCGCGC GGAAAAGCTG
GCCTCCGTGG GGCGGCTGGC CGCGGGCATT GCCCACGAAA TCGGCAACCC CGTGGGCATC
GTGCTGGGCT ACCTGGAGAT GCTCAACGAC CCGGCCCTTT CCCCGGCGGA TCGGCAGGAC
TACCTGAAAC GGTGCGAGGC GGAAATAAAC CGGATCAACA CCACCATTCG GGAACTGCTC
GACTTTTCCC GGCCCGCCGG AGAAAAGCCC TGCCCGGTGG CCCTTTCCCG TGTCATTGAG
GAAACGCTCC GCATGCTGAA TGTGCAGCCC GGAATGAAGG ACATCACCTT TTCATGCGAT
TTTGCCGCGG CCAACGACAC GGTGATGGCT CCGCCGGACC GGCTGCGCCA GGTATTTGTC
AACCTGGTCA TCAACGCGGC CGACGCTCTG GCCTCTGTTT CCGACCAGCA AGAGGGCCGC
ATCACCATCA CCACAAAAAA CCATTGTCCC GACGCCGGCA ACGGACCGGA GATGGTCGAA
GCGTCAGTGA TCGACAACGG TCCGGGCATT GCGGCGCCGG ACCTTGATCT TGTCTTTGAT
CCGTTTTATA CCACCAAGGA GCCGGGCAAA GGCACGGGGC TGGGCCTTTC CGTCTGTTTC
ATGATCATCG AAAGCCTGGG CGGTACCATT CGCATCGACA GCAACCGGGG CCAGGGAACC
GTTCTAAGAA TTGAACTGCC GGCCGCGCAA AAAAAAGGAT CAGGCCATGA AACCGGTTGA
 
Protein sequence
MNTQSLRTII AINLAVLILI ATVLFDVVAL STDRQRFIST KIAEHRLLSL AVAHQLTAKD 
AAAPFFPPDT EPALGALFQA AEVKAVVVLN PSGGFAHITG MTAPEQVPLV ELADRAMQEK
KQVTGLYGKT WGVFLPRPRS LLIAGPLMTG TDTVMGSLGT VTDLNDLYAA QRKDQALLFG
YALFNLILLT LLGTYIIGRF SVSPINRLVR RAEEYRDVED LGFFYDRGKN EFRQLSGALN
RMLKRIGDDK HRLESSLAGL EKANLEIQNR QNELIRAEKL ASVGRLAAGI AHEIGNPVGI
VLGYLEMLND PALSPADRQD YLKRCEAEIN RINTTIRELL DFSRPAGEKP CPVALSRVIE
ETLRMLNVQP GMKDITFSCD FAAANDTVMA PPDRLRQVFV NLVINAADAL ASVSDQQEGR
ITITTKNHCP DAGNGPEMVE ASVIDNGPGI AAPDLDLVFD PFYTTKEPGK GTGLGLSVCF
MIIESLGGTI RIDSNRGQGT VLRIELPAAQ KKGSGHETG