| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1774 |
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| Symbol | |
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| ID | 5694613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2137536 |
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| End bp | 2139983 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641264371 |
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| Product | Patched family protein |
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| Protein accession | YP_001529655 |
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| Protein GI | 158521785 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGGG TAAAAGACCA GATTGAGCGC GGATTTGAGC AGCTGGCCCG CACACTTTAT
ACCCATCGCC TGAAGGTGCT GGTTTTTTTC TGCGTGCTGC TGGGGGCGTT TTTCTACAAG
ATTCCCTCTA TTACCGTGGA CACCTCGGCC GAGGCCCTGC TGGACGAGCA TGACAAAAGC
CGCATCGAAT ACGACCGGTT CCGGGACCAG TTCGGCCAGG ACCGGTTTGT CGTGATTACC
ATCACTTCCG ACCATATCTT TACACAATCC TTTTTTGAAA GGCTTCACAC GTTCCAGGCC
GCGCTGGAGG AGCGGGTCCC TTACGTCAAG GAGGTGACGA GCCTGATCAA CGCCCGGCAT
ACATGGGGCG ACAGCGACGA GCTTATCGTG GAGGATCTGC TGGAAGGGTG GCCGGACCGG
ACCGTGGATT TTGAGGTACT GAGAAACCAG GTGATGGCCA ACCCGGCCTA CCTGCACCAG
TTTATCTCCA CTGACGGCCG CACCACCTCG GTCATCATTG AACCGGATGT TTATCATACG
GAACAGATGG ATGTGCTGGA GGCGTTTGAC AGTTTTGACG AGGAGATATT TGTCGGGGAA
GAGGAGACGC AGCAGAAACG GTACCTGTCC GACATGGAGA ACGAGGTCCT TGTGGAAGCG
GTCCGGGAGG TTGTGGCCGC CTACCATGCC CCCGATTTTT CTCTGGCCCT GGCCGGCGGC
CCGGTGGTGC TGGAGGTCTT TAACGACTAT ACCATGCTGG ACCTCAAAAA ATGCTTTCTG
CTGAGCTTTG TTGTGATCCT GGTTTTTCTC TGGCTGCTGT TCCGCCGGGT TTCCGGCGTG
GTCCTGCCTT CTATCGTTGT GCAGGGCGCC ACCTTTTCCA CCCTGGGGCT GTTGGGATGG
TTCGGCGTGC CCATCAAGAT GACCACCACG GTGCTGCCGG CCTTTCTCCT TTGTGTGGGC
GTGGCCGACT CGGTCCATAT CCTGGCCCTT TTTTACAAGG AGGTGGACCG GGGGGAGAGC
AGGAAGGATG CCATCGGTCA TGCCGTTGGC CATTCCGGCC TTGCCGTGGT ATTGACCTCC
CTGACCACGG CCGCGGCCCT GCTTTCGTTC TCTTTTGCCG AACTGACCGC CCTGGGCGAC
CTTGGCCTTT TTGCCGCCGC CGGTGTGCTC CTGGCGCTGT TCTATACGCT TTTCATGCTG
CCGGCCCTGG TGGCGGTAGT GCCGGTTCGT CCGCGGTCAG CCGGGCGGCA GAAACAGGGC
CGGTCCCTGG TCATGGACCG GGTCCTGTTG CGAACCGCCA ATATCTCCAT CCGCCACCCG
CTCAAAATTA TCGGCATCAG CCTGGTCCTG TTTGCCGTCT CCTTTTATTA TATGTTTGAC
CTGCGTTACT CGGATTACGT GGTCGGTTTT TTCCCTGAGT CCATGGCCGT GCGAAAGGAT
ATCGCCACCA TCGACAAACA GTTGAACGGT TCCCTGCAAC TGGAGGTGAT CATCGATACC
GGCAGGGAAA ACGGCGTGTA TGAGCCCCGT TTTCTCAACC GCATTGACAA TGCCACCCAT
TACCTGTCTC AACATGAAAC ACCTGAAATT GTTGTTGGAA AGATATATTC CTTAAACGAT
CTTCTCAAGG AAATTCATCA GGCCCTGAAT GAGAACAGGC CCGAGTTTTA CGCGATTTCC
CAGGACTACA ACACCATTGC CCAGGAACTG CTGCTGTTTG AAAATGCCGG GTCAGATGAC
CTTGAACCCA TCGTGGACAG CCTTTTTTCA AAGACGCGGG TAAGCATCAA GACCAACTGG
GTGGACTCGG TGGTGCTCAA TGATTTCATG CAGGAGACAA AGCACTATTT TACCACCCTG
TTCGGCGACA GCGCCCGGAT TACCATTACC GGCATGTCCG CCCTGATGGC CCGCACCATT
TCCGCGGCTT TGAACAGCAT GGTGAAAAGC TACGCCCTGG CCTTTGGGGT CATTGCCATC
ATGATGATGC TGCTGGTGTG GGATATCAAG ACCGGGCTGT TCAGCATGAT CCCCAACATT
TTTCCCATTT TTCTCTCCCT GGGCATCATG GGGTTTTTTG ATGTGCCCCT GGACATGACC
TCCCTGATGA TCGCCAGTAT CGCCATGGGG CTGGTGGTGG ATGACACGGT CCATTTTGTT
TACAACTTTA GAAAATATTA CCTGCGCACC GGGGATGCCC ATGAAGCCGT GCGGGCCACG
TTTATGGGCG TGGGCAGGGC ACTGCTGATC ACGTCGGTGG TGCTGGCATT CGGCTTTTTT
GTGCTGATGG CCGCCACCCT CAACCATATC GTGCGGTTCG GGTTTTTCAC CGGCCTGACC
ATCCTGTTCG CCCTGCTGGC CGACTTTCTG CTGGCCCCGG CCCTGATGAT CGTGATCACC
GGGTCACATA AAAGAAGTTC GTCGGCCGCA GCAATGGATT CCAGGTGA
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| Protein sequence | MAGVKDQIER GFEQLARTLY THRLKVLVFF CVLLGAFFYK IPSITVDTSA EALLDEHDKS
RIEYDRFRDQ FGQDRFVVIT ITSDHIFTQS FFERLHTFQA ALEERVPYVK EVTSLINARH
TWGDSDELIV EDLLEGWPDR TVDFEVLRNQ VMANPAYLHQ FISTDGRTTS VIIEPDVYHT
EQMDVLEAFD SFDEEIFVGE EETQQKRYLS DMENEVLVEA VREVVAAYHA PDFSLALAGG
PVVLEVFNDY TMLDLKKCFL LSFVVILVFL WLLFRRVSGV VLPSIVVQGA TFSTLGLLGW
FGVPIKMTTT VLPAFLLCVG VADSVHILAL FYKEVDRGES RKDAIGHAVG HSGLAVVLTS
LTTAAALLSF SFAELTALGD LGLFAAAGVL LALFYTLFML PALVAVVPVR PRSAGRQKQG
RSLVMDRVLL RTANISIRHP LKIIGISLVL FAVSFYYMFD LRYSDYVVGF FPESMAVRKD
IATIDKQLNG SLQLEVIIDT GRENGVYEPR FLNRIDNATH YLSQHETPEI VVGKIYSLND
LLKEIHQALN ENRPEFYAIS QDYNTIAQEL LLFENAGSDD LEPIVDSLFS KTRVSIKTNW
VDSVVLNDFM QETKHYFTTL FGDSARITIT GMSALMARTI SAALNSMVKS YALAFGVIAI
MMMLLVWDIK TGLFSMIPNI FPIFLSLGIM GFFDVPLDMT SLMIASIAMG LVVDDTVHFV
YNFRKYYLRT GDAHEAVRAT FMGVGRALLI TSVVLAFGFF VLMAATLNHI VRFGFFTGLT
ILFALLADFL LAPALMIVIT GSHKRSSSAA AMDSR
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