Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1764 |
Symbol | miaA |
ID | 5694603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2125422 |
End bp | 2126366 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641264361 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_001529645 |
Protein GI | 158521775 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGCG GATGCCCGAC ACGACCCAGA GTGATTGTGC TGTGCGGCCC CACCGGTGTG GGCAAGACCC GCCTTGCTAT CGCCCTTGCC GAGGAGTTCG GCGGCCAGAT CGTGGGGGCC GATTCCATGC AGGTTTACCG GTACATGGAC ATCGGCACGG CCAAGCCCAC CCCGGCCGAA CAGGCCCGGG TGCCCCATCA CATGATTGAC GTGGCAGACC CGGATGAGTC CTTCAGCGCG GGCCGGTATG CGCGGATGGC CCGGCCCATT CTTATGGATT TGAACGAACA GGGCGTACTG CCTGTACTTG CCGGCGGCAC CGGCCTTTAC ATCAAGGCCT GCCTGCATGG GTTGTTTCGC AAGCACTCGG CGGACAAAGC TGTTCTGGAA AGGCTTGAAA GGGAGGCAAA CGATCAGGGG TCGGCGGTCC TGCATCAGCG GCTTGCCGTC TGTGATCCGG AAACCGCGGA ACGCATTCAC CCCAACGATC GGTTCCGCAT TGTCCGGGCA CTTGAGGTGT TTGAGTCCAC CGGGCTGCCG GCCTCCGGCC ACCGGCAGGC CCACGGCTTT GCCGAAGACC CCTTTGACGC GCTGAAGATC TGCCTGCACC TGGACAGAAA GACGCTTTAT GGGCGCATCA ACCACCGCGT GGATCTCATG CTGGCCGACG GGTTTGAAAA GGAGGTGGCC GGCCTGCTGG CCAGGGGATA TGCGCCGGAG TTGAAGGCCA TGCAGTCCAT CGGGTATCGC CACATGACCG CATGGCTGGC CGGCGGCATC TCCCGTGAAA CAGCGGTGGA AAACATGAAG AAAGACACCC GGCGATACGC CAAACGGCAG GAGACCTGGT TTAAGGCCGA CCCGGACATG GTGTGGGTCG ACCAAAAAGA GGGTTTAGAA AAAGTGCCTT TTCTGGTAAA GAGGTTTCTG CGTTATGGTA AATAA
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Protein sequence | MTGGCPTRPR VIVLCGPTGV GKTRLAIALA EEFGGQIVGA DSMQVYRYMD IGTAKPTPAE QARVPHHMID VADPDESFSA GRYARMARPI LMDLNEQGVL PVLAGGTGLY IKACLHGLFR KHSADKAVLE RLEREANDQG SAVLHQRLAV CDPETAERIH PNDRFRIVRA LEVFESTGLP ASGHRQAHGF AEDPFDALKI CLHLDRKTLY GRINHRVDLM LADGFEKEVA GLLARGYAPE LKAMQSIGYR HMTAWLAGGI SRETAVENMK KDTRRYAKRQ ETWFKADPDM VWVDQKEGLE KVPFLVKRFL RYGK
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