Gene Dole_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1750 
Symbol 
ID5694589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp2101153 
End bp2102229 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content60% 
IMG OID641264347 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_001529631 
Protein GI158521761 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0112928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTGA TGAACCCCTT GAACCCTTGG CCCCTTGAAT CCTCGAACCC TTTGATTGCC 
GTTCTTGTCA GCGGCGGAAT AGATTCTCTG GTGGCGGCCC ACCTGCTGAA ACAGTCCGGG 
GCTGACGTGA CGGCCATCCA TTTTCTCACC GGGTATGAAC CGGAAGACCG GGCAGGACGG 
CTTGAAAAGC TGTTTACGCA AATGGATATT CCGGTTTTCA TTTTTGACTG CCGGACCGTG 
TTTCAATCCA ATGTGGTGGA CTATTTTACC GCTGCCTACC TTCGCGGTGA AACACCCAAT 
CCCTGCATGG TGTGCAACAG CCGCATCAAG TTTGGGGCCT GCATGGACTA CGCCCGTTCC 
CTGGGCGCCG ATGCCGTTGC CACGGGCCAT TACTGCCGGA CAACCAAAGA CCCGGACGGT 
GTGCGGCTCT GGAAAGGGGC GGACCCGGCA AAGGAGCAGA GCTATTTTCT TGCCTTTCTG 
TCCCAGGATC AGCTTGGCCG GGCCCGGTTT CCCCTGGAGC GGATGACAAA GGACCAGGTG 
CGGGCCCACG CGGCCCGGCA CGGTCTTGTT CCCATTGAGA GCAAAGAAAG CCAGGATGTC 
TGTTTTATCA GGGGCGAAGA ATGCGCCGAT TTTATAGAGG CCCAGGTTCC GGCCATCCCG 
GGCCCGGGCC CGATTGAAGA CATGACGGGC CGGTTGATCG GCACCCATTC CGGGCTGCAC 
CGGTTTACCG TGGGCCAGCG CAGGGGAATC AACTGCCCGG CTGAACAGCC CTACTATGTG 
GCGGCCCTGG ACATGGCGCG CAACTGCCTG AAGGTGGGGT TCCGGCAGGA CCTGTTTGTC 
CCGGTCTGCC GGGTGGCGCA GGTAAACTGG ATTCCGGACA GGCCGAAAGG TTCCATGAAC 
GTGTCTGTAA AGATCCGGTA CAATCAGACA GAAGTGCCGG CCCGGCTGAC GGCCCTGGGC 
GAAACAGACG CGGTTGTTGA GTTTGTCACG CCCCAGTTTG CCGTGGCCCC GGGCCAGGGA 
GCGGTTTTTT ATGACGGGGA CGCTGTTCTC GGCGGGGGTA TTATCAGGGC GGAATGA
 
Protein sequence
MPLMNPLNPW PLESSNPLIA VLVSGGIDSL VAAHLLKQSG ADVTAIHFLT GYEPEDRAGR 
LEKLFTQMDI PVFIFDCRTV FQSNVVDYFT AAYLRGETPN PCMVCNSRIK FGACMDYARS 
LGADAVATGH YCRTTKDPDG VRLWKGADPA KEQSYFLAFL SQDQLGRARF PLERMTKDQV 
RAHAARHGLV PIESKESQDV CFIRGEECAD FIEAQVPAIP GPGPIEDMTG RLIGTHSGLH 
RFTVGQRRGI NCPAEQPYYV AALDMARNCL KVGFRQDLFV PVCRVAQVNW IPDRPKGSMN 
VSVKIRYNQT EVPARLTALG ETDAVVEFVT PQFAVAPGQG AVFYDGDAVL GGGIIRAE