Gene Dole_1741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1741 
Symbol 
ID5694580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2090964 
End bp2092088 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content57% 
IMG OID641264338 
Productdiguanylate cyclase 
Protein accessionYP_001529622 
Protein GI158521752 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.564976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACG CCATTCAGTC CGCGCAAGCC CCGGCCAATG AGCTGGAAGA CCTGAAAGCC 
CGGTATGAAA AGCTGGTGGA GATCAACAGC AGCTTGAACG AACGGGTGCT GGAGCTTTAC
ACGCTTTACA ACGTGAGCCG GACCCTGAGC ACATCCCTGC ACGTGGCCGA CCTGTTTGAG
GTGGTCATGG GCCTGATCGG CGAGGCCCTT AACGTGGACC AGTACTGCCT GATGTTTCTG
GATGACGAGC TTCAGAAACT TCAGATCCGC GCCAGTCACG GCATTCCGGA AACGGTGGTC
ATGCATGGCG AAATCAAGGT CACGGCCGGG GTTTCCGGAA GAGTGGTGTC CGGCGGACAC
CCTGTGTTGA TTGATGACAT CAGCAAGGAA AGCGATTTTT TCTATTTTCC CGGCAGCGGC
ATAAAGCAGG GCAGTTACCT GGGCGTGCCC CTGAAAAACC AGGAAGGTGT TATCATCGGC
GTTCTCAACG CGCATAAACC CATGGTCAAC GGGTTTTCAA AAAACGACCT GCGGCTTTTT
GCCGCGGTGG CGGAAAACGT GGCCATTGCG GTCAGCAACG CCATGACCCT GCAGCAGACC
CGGGAACTGA TTCGAAAAGA TGAGCTGACC GGCCTGTACA ACCGCCGCTA TTTTTTCGAA
CGGTTCGAGC GGGAGGTCTA CCGGTCCCGG CGTTACGGCC GTACCATCTC CCTTATGATG
ATCGATATCG ATCACTTCAA GGAGTACAAC GACAGCTACG GTCACCTTCG GGGGGACCGG
GTGTTGAAGA CCATTTCCCG TATTTTTGAG TCCAGCCTGC GAAAGATTGA CGTGGTGGCC
CGTTACGGGG GCGAGGAGTT CCTGGTGCTG CTGCCGGAGA CCAGCCGGGA GAACGCCATT
CGTGTGGCGG AAAAACTGCG CCAGGCCGTG GAAAAGGTCG ACTTCAACGA AGACGCCCCC
AACCTGGGCC CTTGTGCCCT GACCATCACC ATCGGTGTTT CAGCGATCCC CGACGATGCC
AACGAGCCGA TTCTGGCCCT GGACCTGGCC GACAAGGCCC TTTACATGGG CAAGGCCCAG
GGTCGCAACC AGGTGTGCAG CAAGGTGCCA AAAGAGACTG TCTGA
 
Protein sequence
MEDAIQSAQA PANELEDLKA RYEKLVEINS SLNERVLELY TLYNVSRTLS TSLHVADLFE 
VVMGLIGEAL NVDQYCLMFL DDELQKLQIR ASHGIPETVV MHGEIKVTAG VSGRVVSGGH
PVLIDDISKE SDFFYFPGSG IKQGSYLGVP LKNQEGVIIG VLNAHKPMVN GFSKNDLRLF
AAVAENVAIA VSNAMTLQQT RELIRKDELT GLYNRRYFFE RFEREVYRSR RYGRTISLMM
IDIDHFKEYN DSYGHLRGDR VLKTISRIFE SSLRKIDVVA RYGGEEFLVL LPETSRENAI
RVAEKLRQAV EKVDFNEDAP NLGPCALTIT IGVSAIPDDA NEPILALDLA DKALYMGKAQ
GRNQVCSKVP KETV