| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1741 |
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| Symbol | |
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| ID | 5694580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2090964 |
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| End bp | 2092088 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641264338 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001529622 |
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| Protein GI | 158521752 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.564976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGACG CCATTCAGTC CGCGCAAGCC CCGGCCAATG AGCTGGAAGA CCTGAAAGCC
CGGTATGAAA AGCTGGTGGA GATCAACAGC AGCTTGAACG AACGGGTGCT GGAGCTTTAC
ACGCTTTACA ACGTGAGCCG GACCCTGAGC ACATCCCTGC ACGTGGCCGA CCTGTTTGAG
GTGGTCATGG GCCTGATCGG CGAGGCCCTT AACGTGGACC AGTACTGCCT GATGTTTCTG
GATGACGAGC TTCAGAAACT TCAGATCCGC GCCAGTCACG GCATTCCGGA AACGGTGGTC
ATGCATGGCG AAATCAAGGT CACGGCCGGG GTTTCCGGAA GAGTGGTGTC CGGCGGACAC
CCTGTGTTGA TTGATGACAT CAGCAAGGAA AGCGATTTTT TCTATTTTCC CGGCAGCGGC
ATAAAGCAGG GCAGTTACCT GGGCGTGCCC CTGAAAAACC AGGAAGGTGT TATCATCGGC
GTTCTCAACG CGCATAAACC CATGGTCAAC GGGTTTTCAA AAAACGACCT GCGGCTTTTT
GCCGCGGTGG CGGAAAACGT GGCCATTGCG GTCAGCAACG CCATGACCCT GCAGCAGACC
CGGGAACTGA TTCGAAAAGA TGAGCTGACC GGCCTGTACA ACCGCCGCTA TTTTTTCGAA
CGGTTCGAGC GGGAGGTCTA CCGGTCCCGG CGTTACGGCC GTACCATCTC CCTTATGATG
ATCGATATCG ATCACTTCAA GGAGTACAAC GACAGCTACG GTCACCTTCG GGGGGACCGG
GTGTTGAAGA CCATTTCCCG TATTTTTGAG TCCAGCCTGC GAAAGATTGA CGTGGTGGCC
CGTTACGGGG GCGAGGAGTT CCTGGTGCTG CTGCCGGAGA CCAGCCGGGA GAACGCCATT
CGTGTGGCGG AAAAACTGCG CCAGGCCGTG GAAAAGGTCG ACTTCAACGA AGACGCCCCC
AACCTGGGCC CTTGTGCCCT GACCATCACC ATCGGTGTTT CAGCGATCCC CGACGATGCC
AACGAGCCGA TTCTGGCCCT GGACCTGGCC GACAAGGCCC TTTACATGGG CAAGGCCCAG
GGTCGCAACC AGGTGTGCAG CAAGGTGCCA AAAGAGACTG TCTGA
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| Protein sequence | MEDAIQSAQA PANELEDLKA RYEKLVEINS SLNERVLELY TLYNVSRTLS TSLHVADLFE
VVMGLIGEAL NVDQYCLMFL DDELQKLQIR ASHGIPETVV MHGEIKVTAG VSGRVVSGGH
PVLIDDISKE SDFFYFPGSG IKQGSYLGVP LKNQEGVIIG VLNAHKPMVN GFSKNDLRLF
AAVAENVAIA VSNAMTLQQT RELIRKDELT GLYNRRYFFE RFEREVYRSR RYGRTISLMM
IDIDHFKEYN DSYGHLRGDR VLKTISRIFE SSLRKIDVVA RYGGEEFLVL LPETSRENAI
RVAEKLRQAV EKVDFNEDAP NLGPCALTIT IGVSAIPDDA NEPILALDLA DKALYMGKAQ
GRNQVCSKVP KETV
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