Gene Dole_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1736 
Symbol 
ID5694575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2085784 
End bp2086203 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content61% 
IMG OID641264333 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001529617 
Protein GI158521747 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.109286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAATA TTTCAGCGGC CCGGCGGGCC GGAAAAAGAG GGGTGGAACT CAACATGGCG 
CCCCTGATCG ACATGATTTT TATCCTGTTG ATCTTTTTCC TGGTGACCAC CAGTTTTGTC
CAGGAGACCG GGCTGGACAT TGACAAGCCG TCCGCCGCCA CCGCCGTTGT CCGGGAAAGC
GCTGACCTGG TGATCGGCAT TACCCGTGAG AACCGGATTT TTATGGGCAG ACGGGAGATT
GACGCGGACC GCCTGCGCCT GGCCGTGGAA CGGGCGATCA CGGAAAAGCC CGAAGCCGAG
GTGTTGATCG TGGCCGACAC CCAGAGCGCC ACCGGCACGG TGATCGAGGT GATGGATGCC
TGCCGGCTGG CCGGGGCCAG GGCCATATCC ATGGCCGCGG GCATACCGGA ACAGCAATGA
 
Protein sequence
MLNISAARRA GKRGVELNMA PLIDMIFILL IFFLVTTSFV QETGLDIDKP SAATAVVRES 
ADLVIGITRE NRIFMGRREI DADRLRLAVE RAITEKPEAE VLIVADTQSA TGTVIEVMDA
CRLAGARAIS MAAGIPEQQ