| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1735 |
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| Symbol | |
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| ID | 5694574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2085081 |
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| End bp | 2085767 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264332 |
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| Product | TonB family protein |
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| Protein accession | YP_001529616 |
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| Protein GI | 158521746 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.298977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCCA CCCCTGTGAT TCATGCCGGG AATTTTCAGA AAGGCCGGGA TTGGGCCGCT
GCCGCCGGCC TTGCGCTGCT GATCAACCTG CTGCTGTTTG CGGCCCTGCC GGCGGTGAAA
CTGCCGCCGG CGCCGGCTGC AGAACCTTAC CGTCAGCCCG GTCCGGTCAC GGTCACCCGG
CTGCGCCCCT CCCGCCCCCT CCCGGCACCG GCCCCTTTGG TAAAGCCTTC AGTGCCTGAA
AAAAAACCGG AAGCTACGGC GCCCGCCAGG TCCGTTCCTG CCGTGAAAAA AGTTCCTGCC
GTGTCACCGG AACCGGTTGA AACGACCCGG CCGGATTCCG GCGCTGAAAC CACACCTGAA
GCCCCGCCGG TGCCTGCCGG GCCACAGGTG TTTGATGCCA TGGACCTGGA CAGCCCTCTT
GTGCCTGTAT TCCGAAAGCC CCCGGTTTAT CCGGCCCATG CCAAACGGCG GAACATCCAG
GGGTGGGTGA CGGTCTCCTT TCTGGTGGAC GCAAAAGGCC GGGTAACGGA TGTGACTGTG
ACAGAATCCG ATCCTGAATC GATTTTTGAC GACAGCGTGA TTCAGTGCGT GAGTGGATGG
CGGTTTAAAC CCGGCACCAT TGCCGGCCGG CCGGTGGTCA CAAAGGTCAC CACCACCATC
CGGTTTGAGC TGAAAGCAGA CGAATGA
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| Protein sequence | MKATPVIHAG NFQKGRDWAA AAGLALLINL LLFAALPAVK LPPAPAAEPY RQPGPVTVTR
LRPSRPLPAP APLVKPSVPE KKPEATAPAR SVPAVKKVPA VSPEPVETTR PDSGAETTPE
APPVPAGPQV FDAMDLDSPL VPVFRKPPVY PAHAKRRNIQ GWVTVSFLVD AKGRVTDVTV
TESDPESIFD DSVIQCVSGW RFKPGTIAGR PVVTKVTTTI RFELKADE
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